Protein–RNA interactions for Protein: Q9CQ90

Uncharacterized protein C9orf85 homolog, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQ90 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.31■■□□□ 1
Q9CQ90 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q9CQ90 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Q9CQ90 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.29■■□□□ 1
Q9CQ90 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Q9CQ90 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.28■■□□□ 1
Q9CQ90 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.28■■□□□ 1
Q9CQ90 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Q9CQ90 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.27■□□□□ 0.99
Q9CQ90 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Q9CQ90 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q9CQ90 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Q9CQ90 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Q9CQ90 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.24■□□□□ 0.99
Q9CQ90 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q9CQ90 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CQ90 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CQ90 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CQ90 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CQ90 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.21■□□□□ 0.99
Q9CQ90 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CQ90 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CQ90 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Q9CQ90 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CQ90 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CQ90 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CQ90 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Q9CQ90 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.18■□□□□ 0.98
Q9CQ90 Gm9397-201ENSMUST00000200125 605 ntBASIC21.17■□□□□ 0.98
Q9CQ90 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CQ90 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CQ90 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CQ90 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Q9CQ90 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Q9CQ90 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q9CQ90 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CQ90 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CQ90 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Q9CQ90 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.12■□□□□ 0.97
Q9CQ90 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q9CQ90 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Q9CQ90 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.11■□□□□ 0.97
Q9CQ90 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q9CQ90 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q9CQ90 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.11■□□□□ 0.97
Q9CQ90 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q9CQ90 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.1■□□□□ 0.97
Q9CQ90 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Q9CQ90 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q9CQ90 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q9CQ90 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9CQ90 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Q9CQ90 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q9CQ90 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Q9CQ90 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.07■□□□□ 0.96
Q9CQ90 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q9CQ90 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q9CQ90 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q9CQ90 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Q9CQ90 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Q9CQ90 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Q9CQ90 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.06■□□□□ 0.96
Q9CQ90 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q9CQ90 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q9CQ90 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q9CQ90 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Q9CQ90 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Q9CQ90 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Q9CQ90 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CQ90 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.02■□□□□ 0.96
Q9CQ90 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CQ90 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.02■□□□□ 0.96
Q9CQ90 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CQ90 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CQ90 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q9CQ90 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9CQ90 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.01■□□□□ 0.95
Q9CQ90 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.01■□□□□ 0.95
Q9CQ90 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CQ90 Gm24970-201ENSMUST00000175582 82 ntBASIC21■□□□□ 0.95
Q9CQ90 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21■□□□□ 0.95
Q9CQ90 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9CQ90 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Q9CQ90 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CQ90 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CQ90 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CQ90 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9CQ90 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Q9CQ90 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CQ90 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CQ90 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9CQ90 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.96■□□□□ 0.95
Q9CQ90 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.95■□□□□ 0.95
Q9CQ90 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQ90 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Q9CQ90 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQ90 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.9■□□□□ 0.94
Q9CQ90 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQ90 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Q9CQ90 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms