Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scrt1Q99M85 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scrt1Q99M85 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Scrt1Q99M85 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scrt1Q99M85 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.33■■□□□ 1.17
Scrt1Q99M85 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Scrt1Q99M85 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Scrt1Q99M85 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.3■■□□□ 1.16
Scrt1Q99M85 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Scrt1Q99M85 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scrt1Q99M85 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.28■■□□□ 1.16
Scrt1Q99M85 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Scrt1Q99M85 Gm24970-201ENSMUST00000175582 82 ntBASIC22.27■■□□□ 1.16
Scrt1Q99M85 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scrt1Q99M85 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.24■■□□□ 1.15
Scrt1Q99M85 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.23■■□□□ 1.15
Scrt1Q99M85 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Scrt1Q99M85 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Scrt1Q99M85 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scrt1Q99M85 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.19■■□□□ 1.14
Scrt1Q99M85 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scrt1Q99M85 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scrt1Q99M85 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scrt1Q99M85 Gm8503-201ENSMUST00000118131 455 ntBASIC22.15■■□□□ 1.14
Scrt1Q99M85 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Scrt1Q99M85 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.14■■□□□ 1.13
Scrt1Q99M85 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Scrt1Q99M85 Gm6821-201ENSMUST00000107540 542 ntBASIC22.11■■□□□ 1.13
Scrt1Q99M85 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.11■■□□□ 1.13
Scrt1Q99M85 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scrt1Q99M85 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scrt1Q99M85 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Scrt1Q99M85 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Scrt1Q99M85 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Scrt1Q99M85 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Scrt1Q99M85 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Scrt1Q99M85 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Scrt1Q99M85 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Scrt1Q99M85 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Scrt1Q99M85 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
Scrt1Q99M85 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scrt1Q99M85 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Scrt1Q99M85 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scrt1Q99M85 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scrt1Q99M85 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scrt1Q99M85 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Scrt1Q99M85 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scrt1Q99M85 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.96■■□□□ 1.11
Scrt1Q99M85 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.95■■□□□ 1.1
Scrt1Q99M85 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scrt1Q99M85 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.95■■□□□ 1.1
Scrt1Q99M85 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Scrt1Q99M85 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scrt1Q99M85 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scrt1Q99M85 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Scrt1Q99M85 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scrt1Q99M85 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Scrt1Q99M85 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Scrt1Q99M85 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scrt1Q99M85 Zxda-201ENSMUST00000117281 2621 ntBASIC21.89■■□□□ 1.09
Scrt1Q99M85 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scrt1Q99M85 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scrt1Q99M85 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Scrt1Q99M85 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Scrt1Q99M85 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Scrt1Q99M85 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.86■■□□□ 1.09
Scrt1Q99M85 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.85■■□□□ 1.09
Scrt1Q99M85 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scrt1Q99M85 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scrt1Q99M85 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Scrt1Q99M85 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scrt1Q99M85 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.82■■□□□ 1.08
Scrt1Q99M85 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.82■■□□□ 1.08
Scrt1Q99M85 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scrt1Q99M85 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scrt1Q99M85 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scrt1Q99M85 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Scrt1Q99M85 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.78■■□□□ 1.08
Scrt1Q99M85 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scrt1Q99M85 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Scrt1Q99M85 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scrt1Q99M85 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scrt1Q99M85 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scrt1Q99M85 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Scrt1Q99M85 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.74■■□□□ 1.07
Scrt1Q99M85 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scrt1Q99M85 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scrt1Q99M85 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scrt1Q99M85 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Scrt1Q99M85 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.72■■□□□ 1.07
Scrt1Q99M85 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scrt1Q99M85 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scrt1Q99M85 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scrt1Q99M85 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Scrt1Q99M85 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Scrt1Q99M85 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scrt1Q99M85 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.7■■□□□ 1.06
Scrt1Q99M85 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.69■■□□□ 1.06
Scrt1Q99M85 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Scrt1Q99M85 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms