Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb17Q91VD8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb17Q91VD8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb17Q91VD8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb17Q91VD8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
Pcdhb17Q91VD8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb17Q91VD8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Pcdhb17Q91VD8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhb17Q91VD8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb17Q91VD8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb17Q91VD8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.36■■□□□ 1.81
Pcdhb17Q91VD8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb17Q91VD8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Pcdhb17Q91VD8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.36■■□□□ 1.81
Pcdhb17Q91VD8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb17Q91VD8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb17Q91VD8 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.35■■□□□ 1.81
Pcdhb17Q91VD8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Pcdhb17Q91VD8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.34■■□□□ 1.81
Pcdhb17Q91VD8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhb17Q91VD8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb17Q91VD8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Pcdhb17Q91VD8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Pcdhb17Q91VD8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb17Q91VD8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb17Q91VD8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Pcdhb17Q91VD8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhb17Q91VD8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb17Q91VD8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb17Q91VD8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb17Q91VD8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhb17Q91VD8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb17Q91VD8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhb17Q91VD8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.25■■□□□ 1.79
Pcdhb17Q91VD8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Pcdhb17Q91VD8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Pcdhb17Q91VD8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb17Q91VD8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb17Q91VD8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.22■■□□□ 1.79
Pcdhb17Q91VD8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhb17Q91VD8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.2■■□□□ 1.78
Pcdhb17Q91VD8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb17Q91VD8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.17■■□□□ 1.78
Pcdhb17Q91VD8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb17Q91VD8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb17Q91VD8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb17Q91VD8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Pcdhb17Q91VD8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb17Q91VD8 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.13■■□□□ 1.77
Pcdhb17Q91VD8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb17Q91VD8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb17Q91VD8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb17Q91VD8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhb17Q91VD8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb17Q91VD8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb17Q91VD8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
Pcdhb17Q91VD8 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.09■■□□□ 1.77
Pcdhb17Q91VD8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb17Q91VD8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb17Q91VD8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.08■■□□□ 1.77
Pcdhb17Q91VD8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb17Q91VD8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Pcdhb17Q91VD8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb17Q91VD8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.06■■□□□ 1.76
Pcdhb17Q91VD8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb17Q91VD8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb17Q91VD8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb17Q91VD8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdhb17Q91VD8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb17Q91VD8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Pcdhb17Q91VD8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb17Q91VD8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb17Q91VD8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.02■■□□□ 1.76
Pcdhb17Q91VD8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb17Q91VD8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb17Q91VD8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb17Q91VD8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.99■■□□□ 1.75
Pcdhb17Q91VD8 Gm9397-201ENSMUST00000200125 605 ntBASIC25.99■■□□□ 1.75
Pcdhb17Q91VD8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb17Q91VD8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhb17Q91VD8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb17Q91VD8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.95■■□□□ 1.74
Pcdhb17Q91VD8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb17Q91VD8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb17Q91VD8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Pcdhb17Q91VD8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Pcdhb17Q91VD8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb17Q91VD8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb17Q91VD8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb17Q91VD8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Pcdhb17Q91VD8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb17Q91VD8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb17Q91VD8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb17Q91VD8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.9■■□□□ 1.74
Pcdhb17Q91VD8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.9■■□□□ 1.74
Pcdhb17Q91VD8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb17Q91VD8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhb17Q91VD8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb17Q91VD8 Gm45855-201ENSMUST00000212546 880 ntBASIC25.87■■□□□ 1.73
Pcdhb17Q91VD8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms