Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sft2d2Q8VD57 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.34■□□□□ 0.85
Sft2d2Q8VD57 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sft2d2Q8VD57 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sft2d2Q8VD57 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sft2d2Q8VD57 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sft2d2Q8VD57 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sft2d2Q8VD57 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.32■□□□□ 0.84
Sft2d2Q8VD57 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sft2d2Q8VD57 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sft2d2Q8VD57 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.29■□□□□ 0.84
Sft2d2Q8VD57 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sft2d2Q8VD57 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sft2d2Q8VD57 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sft2d2Q8VD57 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sft2d2Q8VD57 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sft2d2Q8VD57 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sft2d2Q8VD57 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sft2d2Q8VD57 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sft2d2Q8VD57 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sft2d2Q8VD57 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sft2d2Q8VD57 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sft2d2Q8VD57 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.22■□□□□ 0.83
Sft2d2Q8VD57 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sft2d2Q8VD57 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sft2d2Q8VD57 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sft2d2Q8VD57 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sft2d2Q8VD57 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.19■□□□□ 0.82
Sft2d2Q8VD57 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.19■□□□□ 0.82
Sft2d2Q8VD57 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sft2d2Q8VD57 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sft2d2Q8VD57 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sft2d2Q8VD57 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sft2d2Q8VD57 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sft2d2Q8VD57 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.14■□□□□ 0.81
Sft2d2Q8VD57 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sft2d2Q8VD57 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Sft2d2Q8VD57 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sft2d2Q8VD57 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sft2d2Q8VD57 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sft2d2Q8VD57 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.11■□□□□ 0.81
Sft2d2Q8VD57 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sft2d2Q8VD57 Mipep-204ENSMUST00000225043 1548 ntBASIC20.11■□□□□ 0.81
Sft2d2Q8VD57 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sft2d2Q8VD57 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sft2d2Q8VD57 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sft2d2Q8VD57 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sft2d2Q8VD57 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sft2d2Q8VD57 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sft2d2Q8VD57 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sft2d2Q8VD57 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sft2d2Q8VD57 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sft2d2Q8VD57 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sft2d2Q8VD57 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sft2d2Q8VD57 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sft2d2Q8VD57 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sft2d2Q8VD57 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sft2d2Q8VD57 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sft2d2Q8VD57 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sft2d2Q8VD57 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sft2d2Q8VD57 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sft2d2Q8VD57 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sft2d2Q8VD57 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sft2d2Q8VD57 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.03■□□□□ 0.8
Sft2d2Q8VD57 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sft2d2Q8VD57 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sft2d2Q8VD57 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sft2d2Q8VD57 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.01■□□□□ 0.79
Sft2d2Q8VD57 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Sft2d2Q8VD57 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sft2d2Q8VD57 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sft2d2Q8VD57 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sft2d2Q8VD57 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Sft2d2Q8VD57 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sft2d2Q8VD57 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sft2d2Q8VD57 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sft2d2Q8VD57 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Sft2d2Q8VD57 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sft2d2Q8VD57 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sft2d2Q8VD57 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sft2d2Q8VD57 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sft2d2Q8VD57 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sft2d2Q8VD57 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.96■□□□□ 0.79
Sft2d2Q8VD57 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sft2d2Q8VD57 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sft2d2Q8VD57 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sft2d2Q8VD57 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sft2d2Q8VD57 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sft2d2Q8VD57 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sft2d2Q8VD57 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sft2d2Q8VD57 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sft2d2Q8VD57 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sft2d2Q8VD57 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sft2d2Q8VD57 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sft2d2Q8VD57 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sft2d2Q8VD57 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.91■□□□□ 0.78
Sft2d2Q8VD57 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sft2d2Q8VD57 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sft2d2Q8VD57 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Sft2d2Q8VD57 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms