Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Rnf8Q8VC56 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf8Q8VC56 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf8Q8VC56 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf8Q8VC56 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf8Q8VC56 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf8Q8VC56 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rnf8Q8VC56 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Rnf8Q8VC56 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Peli2-204ENSMUST00000226513 1320 ntBASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf8Q8VC56 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rnf8Q8VC56 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf8Q8VC56 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf8Q8VC56 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf8Q8VC56 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf8Q8VC56 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.91■■□□□ 1.42
Rnf8Q8VC56 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Rnf8Q8VC56 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf8Q8VC56 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf8Q8VC56 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf8Q8VC56 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rnf8Q8VC56 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.88■■□□□ 1.41
Rnf8Q8VC56 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf8Q8VC56 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf8Q8VC56 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.87■■□□□ 1.41
Rnf8Q8VC56 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.87■■□□□ 1.41
Rnf8Q8VC56 Gm16148-201ENSMUST00000119653 893 ntBASIC23.87■■□□□ 1.41
Rnf8Q8VC56 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf8Q8VC56 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Rnf8Q8VC56 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf8Q8VC56 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf8Q8VC56 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
Rnf8Q8VC56 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf8Q8VC56 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf8Q8VC56 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Rnf8Q8VC56 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf8Q8VC56 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf8Q8VC56 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf8Q8VC56 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf8Q8VC56 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rnf8Q8VC56 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf8Q8VC56 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf8Q8VC56 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf8Q8VC56 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf8Q8VC56 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf8Q8VC56 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rnf8Q8VC56 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf8Q8VC56 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf8Q8VC56 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf8Q8VC56 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf8Q8VC56 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf8Q8VC56 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf8Q8VC56 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Rnf8Q8VC56 Zfp131-205ENSMUST00000223812 663 ntBASIC23.66■■□□□ 1.38
Rnf8Q8VC56 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf8Q8VC56 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.63■■□□□ 1.37
Rnf8Q8VC56 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.62■■□□□ 1.37
Rnf8Q8VC56 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf8Q8VC56 Amer2-203ENSMUST00000225247 2662 ntBASIC23.61■■□□□ 1.37
Rnf8Q8VC56 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Rnf8Q8VC56 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf8Q8VC56 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
Rnf8Q8VC56 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rnf8Q8VC56 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.57■■□□□ 1.36
Rnf8Q8VC56 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf8Q8VC56 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf8Q8VC56 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf8Q8VC56 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf8Q8VC56 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf8Q8VC56 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Rnf8Q8VC56 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf8Q8VC56 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf8Q8VC56 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf8Q8VC56 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf8Q8VC56 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf8Q8VC56 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Rnf8Q8VC56 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms