Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rpp40Q8R1F9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Rpp40Q8R1F9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.63■■■□□ 2.01
Rpp40Q8R1F9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rpp40Q8R1F9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rpp40Q8R1F9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Rpp40Q8R1F9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Rpp40Q8R1F9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Rpp40Q8R1F9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rpp40Q8R1F9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.54■■■□□ 2
Rpp40Q8R1F9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rpp40Q8R1F9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Rpp40Q8R1F9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Rpp40Q8R1F9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rpp40Q8R1F9 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.47■■□□□ 1.99
Rpp40Q8R1F9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Rpp40Q8R1F9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rpp40Q8R1F9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Rpp40Q8R1F9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rpp40Q8R1F9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rpp40Q8R1F9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rpp40Q8R1F9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Rpp40Q8R1F9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rpp40Q8R1F9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rpp40Q8R1F9 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.4■■□□□ 1.98
Rpp40Q8R1F9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rpp40Q8R1F9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rpp40Q8R1F9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rpp40Q8R1F9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
Rpp40Q8R1F9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rpp40Q8R1F9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rpp40Q8R1F9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rpp40Q8R1F9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rpp40Q8R1F9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpp40Q8R1F9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpp40Q8R1F9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Rpp40Q8R1F9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpp40Q8R1F9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Rpp40Q8R1F9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rpp40Q8R1F9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.28■■□□□ 1.96
Rpp40Q8R1F9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.27■■□□□ 1.96
Rpp40Q8R1F9 Gm9397-201ENSMUST00000200125 605 ntBASIC27.27■■□□□ 1.96
Rpp40Q8R1F9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Rpp40Q8R1F9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpp40Q8R1F9 Gm45855-201ENSMUST00000212546 880 ntBASIC27.26■■□□□ 1.95
Rpp40Q8R1F9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rpp40Q8R1F9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.23■■□□□ 1.95
Rpp40Q8R1F9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rpp40Q8R1F9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.23■■□□□ 1.95
Rpp40Q8R1F9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rpp40Q8R1F9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rpp40Q8R1F9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Rpp40Q8R1F9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Rpp40Q8R1F9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Rpp40Q8R1F9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.14■■□□□ 1.94
Rpp40Q8R1F9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Rpp40Q8R1F9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rpp40Q8R1F9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rpp40Q8R1F9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpp40Q8R1F9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpp40Q8R1F9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpp40Q8R1F9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpp40Q8R1F9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rpp40Q8R1F9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpp40Q8R1F9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rpp40Q8R1F9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rpp40Q8R1F9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rpp40Q8R1F9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpp40Q8R1F9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.05■■□□□ 1.92
Rpp40Q8R1F9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.05■■□□□ 1.92
Rpp40Q8R1F9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rpp40Q8R1F9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Rpp40Q8R1F9 Gm24970-201ENSMUST00000175582 82 ntBASIC27.03■■□□□ 1.92
Rpp40Q8R1F9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.03■■□□□ 1.92
Rpp40Q8R1F9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rpp40Q8R1F9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rpp40Q8R1F9 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.01■■□□□ 1.92
Rpp40Q8R1F9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
Rpp40Q8R1F9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rpp40Q8R1F9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rpp40Q8R1F9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.98■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms