Protein–RNA interactions for Protein: Q8K3D3

Swi5, DNA repair protein SWI5 homolog, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swi5Q8K3D3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Swi5Q8K3D3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Swi5Q8K3D3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Swi5Q8K3D3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Swi5Q8K3D3 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.68■■□□□ 1.22
Swi5Q8K3D3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Swi5Q8K3D3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Swi5Q8K3D3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Swi5Q8K3D3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Swi5Q8K3D3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Swi5Q8K3D3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Swi5Q8K3D3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Swi5Q8K3D3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Swi5Q8K3D3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Swi5Q8K3D3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Swi5Q8K3D3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Swi5Q8K3D3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Swi5Q8K3D3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Swi5Q8K3D3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
Swi5Q8K3D3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Swi5Q8K3D3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Swi5Q8K3D3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Swi5Q8K3D3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Swi5Q8K3D3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Swi5Q8K3D3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Swi5Q8K3D3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Swi5Q8K3D3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.6■■□□□ 1.21
Swi5Q8K3D3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Swi5Q8K3D3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Swi5Q8K3D3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Swi5Q8K3D3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Swi5Q8K3D3 Amer2-203ENSMUST00000225247 2662 ntBASIC22.54■■□□□ 1.2
Swi5Q8K3D3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Swi5Q8K3D3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Swi5Q8K3D3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Swi5Q8K3D3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Swi5Q8K3D3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Swi5Q8K3D3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Swi5Q8K3D3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Swi5Q8K3D3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Swi5Q8K3D3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Swi5Q8K3D3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Swi5Q8K3D3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Swi5Q8K3D3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.48■■□□□ 1.19
Swi5Q8K3D3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Swi5Q8K3D3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Swi5Q8K3D3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Swi5Q8K3D3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
Swi5Q8K3D3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Swi5Q8K3D3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Swi5Q8K3D3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.44■■□□□ 1.18
Swi5Q8K3D3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Swi5Q8K3D3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Swi5Q8K3D3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Swi5Q8K3D3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Swi5Q8K3D3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Swi5Q8K3D3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Swi5Q8K3D3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Swi5Q8K3D3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Swi5Q8K3D3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Swi5Q8K3D3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Swi5Q8K3D3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Swi5Q8K3D3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Swi5Q8K3D3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Swi5Q8K3D3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Swi5Q8K3D3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Swi5Q8K3D3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Swi5Q8K3D3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Swi5Q8K3D3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Swi5Q8K3D3 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.36■■□□□ 1.17
Swi5Q8K3D3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Swi5Q8K3D3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.35■■□□□ 1.17
Swi5Q8K3D3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Swi5Q8K3D3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Swi5Q8K3D3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
Swi5Q8K3D3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Swi5Q8K3D3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Swi5Q8K3D3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Swi5Q8K3D3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Swi5Q8K3D3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Swi5Q8K3D3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Swi5Q8K3D3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Swi5Q8K3D3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Swi5Q8K3D3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.29■■□□□ 1.16
Swi5Q8K3D3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Swi5Q8K3D3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Swi5Q8K3D3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Swi5Q8K3D3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Swi5Q8K3D3 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.27■■□□□ 1.16
Swi5Q8K3D3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.27■■□□□ 1.16
Swi5Q8K3D3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Swi5Q8K3D3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Swi5Q8K3D3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Swi5Q8K3D3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Swi5Q8K3D3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Swi5Q8K3D3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Swi5Q8K3D3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Swi5Q8K3D3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.24■■□□□ 1.15
Swi5Q8K3D3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Swi5Q8K3D3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms