Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lrrtm1Q8K377 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrtm1Q8K377 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm1Q8K377 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrtm1Q8K377 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrtm1Q8K377 Gm25262-201ENSMUST00000174934 133 ntBASIC21.44■■□□□ 1.02
Lrrtm1Q8K377 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrtm1Q8K377 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.42■■□□□ 1.02
Lrrtm1Q8K377 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrtm1Q8K377 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrtm1Q8K377 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrtm1Q8K377 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrtm1Q8K377 Amer2-203ENSMUST00000225247 2662 ntBASIC21.38■■□□□ 1.01
Lrrtm1Q8K377 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrtm1Q8K377 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Lrrtm1Q8K377 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Lrrtm1Q8K377 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.35■■□□□ 1.01
Lrrtm1Q8K377 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Lrrtm1Q8K377 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lrrtm1Q8K377 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrtm1Q8K377 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lrrtm1Q8K377 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrtm1Q8K377 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Lrrtm1Q8K377 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.29■■□□□ 1
Lrrtm1Q8K377 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrtm1Q8K377 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrtm1Q8K377 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrtm1Q8K377 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrtm1Q8K377 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm1Q8K377 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Lrrtm1Q8K377 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm1Q8K377 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm1Q8K377 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm1Q8K377 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrtm1Q8K377 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrtm1Q8K377 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrtm1Q8K377 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lrrtm1Q8K377 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.24■□□□□ 0.99
Lrrtm1Q8K377 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrtm1Q8K377 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrtm1Q8K377 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.23■□□□□ 0.99
Lrrtm1Q8K377 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrtm1Q8K377 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrtm1Q8K377 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm1Q8K377 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm1Q8K377 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.21■□□□□ 0.99
Lrrtm1Q8K377 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm1Q8K377 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm1Q8K377 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Lrrtm1Q8K377 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrrtm1Q8K377 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.2■□□□□ 0.98
Lrrtm1Q8K377 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrtm1Q8K377 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lrrtm1Q8K377 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrtm1Q8K377 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lrrtm1Q8K377 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Lrrtm1Q8K377 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lrrtm1Q8K377 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrtm1Q8K377 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrtm1Q8K377 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrtm1Q8K377 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lrrtm1Q8K377 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Lrrtm1Q8K377 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.14■□□□□ 0.97
Lrrtm1Q8K377 Gm27322-201ENSMUST00000184007 104 ntBASIC21.14■□□□□ 0.97
Lrrtm1Q8K377 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrtm1Q8K377 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrtm1Q8K377 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.13■□□□□ 0.97
Lrrtm1Q8K377 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.12■□□□□ 0.97
Lrrtm1Q8K377 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrtm1Q8K377 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrtm1Q8K377 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.12■□□□□ 0.97
Lrrtm1Q8K377 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrtm1Q8K377 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm1Q8K377 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm1Q8K377 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Lrrtm1Q8K377 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm1Q8K377 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lrrtm1Q8K377 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.1■□□□□ 0.97
Lrrtm1Q8K377 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.09■□□□□ 0.97
Lrrtm1Q8K377 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.09■□□□□ 0.97
Lrrtm1Q8K377 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.09■□□□□ 0.97
Lrrtm1Q8K377 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.09■□□□□ 0.97
Lrrtm1Q8K377 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Lrrtm1Q8K377 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lrrtm1Q8K377 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lrrtm1Q8K377 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lrrtm1Q8K377 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Lrrtm1Q8K377 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.06■□□□□ 0.96
Lrrtm1Q8K377 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lrrtm1Q8K377 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lrrtm1Q8K377 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lrrtm1Q8K377 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lrrtm1Q8K377 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lrrtm1Q8K377 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Lrrtm1Q8K377 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrrtm1Q8K377 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lrrtm1Q8K377 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrrtm1Q8K377 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lrrtm1Q8K377 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lrrtm1Q8K377 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms