Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
Trim68Q8K243 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
Trim68Q8K243 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Trim68Q8K243 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.43■■□□□ 1.98
Trim68Q8K243 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.43■■□□□ 1.98
Trim68Q8K243 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.41■■□□□ 1.98
Trim68Q8K243 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim68Q8K243 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Trim68Q8K243 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim68Q8K243 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.35■■□□□ 1.97
Trim68Q8K243 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trim68Q8K243 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.34■■□□□ 1.97
Trim68Q8K243 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Trim68Q8K243 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.33■■□□□ 1.97
Trim68Q8K243 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Trim68Q8K243 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.32■■□□□ 1.96
Trim68Q8K243 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.3■■□□□ 1.96
Trim68Q8K243 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.3■■□□□ 1.96
Trim68Q8K243 Gm8503-201ENSMUST00000118131 455 ntBASIC27.29■■□□□ 1.96
Trim68Q8K243 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trim68Q8K243 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Trim68Q8K243 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trim68Q8K243 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trim68Q8K243 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim68Q8K243 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Trim68Q8K243 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim68Q8K243 Gm6821-201ENSMUST00000107540 542 ntBASIC27.23■■□□□ 1.95
Trim68Q8K243 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim68Q8K243 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trim68Q8K243 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trim68Q8K243 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim68Q8K243 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Trim68Q8K243 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Trim68Q8K243 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim68Q8K243 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim68Q8K243 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim68Q8K243 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Trim68Q8K243 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Trim68Q8K243 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim68Q8K243 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim68Q8K243 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim68Q8K243 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Trim68Q8K243 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim68Q8K243 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trim68Q8K243 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Trim68Q8K243 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.06■■□□□ 1.92
Trim68Q8K243 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim68Q8K243 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
Trim68Q8K243 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Trim68Q8K243 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.05■■□□□ 1.92
Trim68Q8K243 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim68Q8K243 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim68Q8K243 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Trim68Q8K243 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Trim68Q8K243 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Trim68Q8K243 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
Trim68Q8K243 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Trim68Q8K243 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim68Q8K243 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim68Q8K243 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
Trim68Q8K243 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trim68Q8K243 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.92■■□□□ 1.9
Trim68Q8K243 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim68Q8K243 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
Trim68Q8K243 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim68Q8K243 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.9■■□□□ 1.9
Trim68Q8K243 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim68Q8K243 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
Trim68Q8K243 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trim68Q8K243 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Trim68Q8K243 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.85■■□□□ 1.89
Trim68Q8K243 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.85■■□□□ 1.89
Trim68Q8K243 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trim68Q8K243 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.82■■□□□ 1.88
Trim68Q8K243 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.81■■□□□ 1.88
Trim68Q8K243 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Trim68Q8K243 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Trim68Q8K243 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim68Q8K243 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.79■■□□□ 1.88
Trim68Q8K243 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim68Q8K243 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Trim68Q8K243 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim68Q8K243 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Trim68Q8K243 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trim68Q8K243 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trim68Q8K243 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trim68Q8K243 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
Trim68Q8K243 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trim68Q8K243 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.73■■□□□ 1.87
Trim68Q8K243 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.71■■□□□ 1.87
Trim68Q8K243 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.71■■□□□ 1.87
Trim68Q8K243 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Trim68Q8K243 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Trim68Q8K243 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim68Q8K243 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.69■■□□□ 1.86
Trim68Q8K243 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Trim68Q8K243 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trim68Q8K243 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.68■■□□□ 1.86
Trim68Q8K243 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim68Q8K243 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms