Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
PdgfcQ8CI19 Gm24970-201ENSMUST00000175582 82 ntBASIC28.89■■■□□ 2.22
PdgfcQ8CI19 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PdgfcQ8CI19 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.88■■■□□ 2.21
PdgfcQ8CI19 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PdgfcQ8CI19 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PdgfcQ8CI19 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
PdgfcQ8CI19 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PdgfcQ8CI19 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PdgfcQ8CI19 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
PdgfcQ8CI19 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.82■■■□□ 2.2
PdgfcQ8CI19 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.81■■■□□ 2.2
PdgfcQ8CI19 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PdgfcQ8CI19 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.81■■■□□ 2.2
PdgfcQ8CI19 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PdgfcQ8CI19 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PdgfcQ8CI19 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.77■■■□□ 2.2
PdgfcQ8CI19 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PdgfcQ8CI19 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PdgfcQ8CI19 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
PdgfcQ8CI19 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
PdgfcQ8CI19 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.72■■■□□ 2.19
PdgfcQ8CI19 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PdgfcQ8CI19 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PdgfcQ8CI19 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PdgfcQ8CI19 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.68■■■□□ 2.18
PdgfcQ8CI19 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PdgfcQ8CI19 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PdgfcQ8CI19 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.63■■■□□ 2.17
PdgfcQ8CI19 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.61■■■□□ 2.17
PdgfcQ8CI19 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PdgfcQ8CI19 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PdgfcQ8CI19 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.6■■■□□ 2.17
PdgfcQ8CI19 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PdgfcQ8CI19 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PdgfcQ8CI19 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PdgfcQ8CI19 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PdgfcQ8CI19 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PdgfcQ8CI19 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PdgfcQ8CI19 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
PdgfcQ8CI19 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PdgfcQ8CI19 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
PdgfcQ8CI19 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PdgfcQ8CI19 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.52■■■□□ 2.16
PdgfcQ8CI19 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PdgfcQ8CI19 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PdgfcQ8CI19 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.51■■■□□ 2.15
PdgfcQ8CI19 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PdgfcQ8CI19 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PdgfcQ8CI19 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
PdgfcQ8CI19 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
PdgfcQ8CI19 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PdgfcQ8CI19 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PdgfcQ8CI19 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PdgfcQ8CI19 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PdgfcQ8CI19 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.45■■■□□ 2.14
PdgfcQ8CI19 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
PdgfcQ8CI19 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PdgfcQ8CI19 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
PdgfcQ8CI19 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
PdgfcQ8CI19 Gm8503-201ENSMUST00000118131 455 ntBASIC28.43■■■□□ 2.14
PdgfcQ8CI19 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.43■■■□□ 2.14
PdgfcQ8CI19 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
PdgfcQ8CI19 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
PdgfcQ8CI19 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PdgfcQ8CI19 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
PdgfcQ8CI19 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.4■■■□□ 2.14
PdgfcQ8CI19 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PdgfcQ8CI19 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PdgfcQ8CI19 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PdgfcQ8CI19 Gm6821-201ENSMUST00000107540 542 ntBASIC28.39■■■□□ 2.14
PdgfcQ8CI19 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PdgfcQ8CI19 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.39■■■□□ 2.13
PdgfcQ8CI19 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PdgfcQ8CI19 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PdgfcQ8CI19 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.36■■■□□ 2.13
PdgfcQ8CI19 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PdgfcQ8CI19 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PdgfcQ8CI19 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.33■■■□□ 2.13
PdgfcQ8CI19 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
PdgfcQ8CI19 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PdgfcQ8CI19 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PdgfcQ8CI19 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
PdgfcQ8CI19 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PdgfcQ8CI19 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.29■■■□□ 2.12
PdgfcQ8CI19 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.25■■■□□ 2.11
PdgfcQ8CI19 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PdgfcQ8CI19 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PdgfcQ8CI19 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PdgfcQ8CI19 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PdgfcQ8CI19 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PdgfcQ8CI19 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PdgfcQ8CI19 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PdgfcQ8CI19 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
PdgfcQ8CI19 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PdgfcQ8CI19 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
PdgfcQ8CI19 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.19■■■□□ 2.1
PdgfcQ8CI19 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PdgfcQ8CI19 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PdgfcQ8CI19 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.18■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms