Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zim1Q8C393 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zim1Q8C393 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zim1Q8C393 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zim1Q8C393 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.84■□□□□ 0.93
Zim1Q8C393 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Zim1Q8C393 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zim1Q8C393 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zim1Q8C393 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zim1Q8C393 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Zim1Q8C393 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zim1Q8C393 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zim1Q8C393 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zim1Q8C393 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zim1Q8C393 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Zim1Q8C393 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zim1Q8C393 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zim1Q8C393 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Zim1Q8C393 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Zim1Q8C393 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zim1Q8C393 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zim1Q8C393 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Zim1Q8C393 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zim1Q8C393 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Zim1Q8C393 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zim1Q8C393 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zim1Q8C393 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Zim1Q8C393 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zim1Q8C393 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zim1Q8C393 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zim1Q8C393 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.74■□□□□ 0.91
Zim1Q8C393 Peli2-204ENSMUST00000226513 1320 ntBASIC20.74■□□□□ 0.91
Zim1Q8C393 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zim1Q8C393 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zim1Q8C393 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zim1Q8C393 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zim1Q8C393 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zim1Q8C393 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zim1Q8C393 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Zim1Q8C393 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.71■□□□□ 0.91
Zim1Q8C393 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Zim1Q8C393 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Zim1Q8C393 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Zim1Q8C393 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Zim1Q8C393 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Zim1Q8C393 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.69■□□□□ 0.9
Zim1Q8C393 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Zim1Q8C393 Gm16148-201ENSMUST00000119653 893 ntBASIC20.68■□□□□ 0.9
Zim1Q8C393 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Zim1Q8C393 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Zim1Q8C393 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Zim1Q8C393 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Zim1Q8C393 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.66■□□□□ 0.9
Zim1Q8C393 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
Zim1Q8C393 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Zim1Q8C393 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Zim1Q8C393 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Zim1Q8C393 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Zim1Q8C393 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.63■□□□□ 0.89
Zim1Q8C393 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Zim1Q8C393 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Zim1Q8C393 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Zim1Q8C393 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zim1Q8C393 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Zim1Q8C393 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Zim1Q8C393 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Zim1Q8C393 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Zim1Q8C393 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Zim1Q8C393 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zim1Q8C393 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zim1Q8C393 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zim1Q8C393 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zim1Q8C393 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zim1Q8C393 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zim1Q8C393 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.55■□□□□ 0.88
Zim1Q8C393 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zim1Q8C393 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zim1Q8C393 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zim1Q8C393 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zim1Q8C393 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Zim1Q8C393 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zim1Q8C393 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zim1Q8C393 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zim1Q8C393 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Zim1Q8C393 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zim1Q8C393 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zim1Q8C393 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zim1Q8C393 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zim1Q8C393 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.49■□□□□ 0.87
Zim1Q8C393 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zim1Q8C393 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zim1Q8C393 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zim1Q8C393 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zim1Q8C393 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.49■□□□□ 0.87
Zim1Q8C393 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zim1Q8C393 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zim1Q8C393 Zfp131-205ENSMUST00000223812 663 ntBASIC20.48■□□□□ 0.87
Zim1Q8C393 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Zim1Q8C393 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Zim1Q8C393 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms