Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rnf38Q8BI21 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf38Q8BI21 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf38Q8BI21 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf38Q8BI21 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf38Q8BI21 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf38Q8BI21 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf38Q8BI21 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf38Q8BI21 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf38Q8BI21 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf38Q8BI21 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf38Q8BI21 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf38Q8BI21 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf38Q8BI21 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf38Q8BI21 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf38Q8BI21 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf38Q8BI21 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
Rnf38Q8BI21 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Rnf38Q8BI21 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf38Q8BI21 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf38Q8BI21 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.36■■□□□ 1.49
Rnf38Q8BI21 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.36■■□□□ 1.49
Rnf38Q8BI21 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf38Q8BI21 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf38Q8BI21 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Rnf38Q8BI21 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Rnf38Q8BI21 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Rnf38Q8BI21 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rnf38Q8BI21 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Rnf38Q8BI21 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf38Q8BI21 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf38Q8BI21 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Rnf38Q8BI21 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf38Q8BI21 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf38Q8BI21 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf38Q8BI21 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
Rnf38Q8BI21 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf38Q8BI21 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf38Q8BI21 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.27■■□□□ 1.48
Rnf38Q8BI21 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.27■■□□□ 1.48
Rnf38Q8BI21 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rnf38Q8BI21 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Rnf38Q8BI21 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf38Q8BI21 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf38Q8BI21 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnf38Q8BI21 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.23■■□□□ 1.47
Rnf38Q8BI21 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf38Q8BI21 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.22■■□□□ 1.47
Rnf38Q8BI21 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf38Q8BI21 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Rnf38Q8BI21 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Rnf38Q8BI21 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Rnf38Q8BI21 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf38Q8BI21 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf38Q8BI21 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf38Q8BI21 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnf38Q8BI21 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Rnf38Q8BI21 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf38Q8BI21 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf38Q8BI21 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf38Q8BI21 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf38Q8BI21 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.15■■□□□ 1.46
Rnf38Q8BI21 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.14■■□□□ 1.46
Rnf38Q8BI21 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.14■■□□□ 1.46
Rnf38Q8BI21 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.14■■□□□ 1.45
Rnf38Q8BI21 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.14■■□□□ 1.45
Rnf38Q8BI21 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rnf38Q8BI21 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf38Q8BI21 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf38Q8BI21 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf38Q8BI21 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf38Q8BI21 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf38Q8BI21 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf38Q8BI21 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf38Q8BI21 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf38Q8BI21 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf38Q8BI21 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf38Q8BI21 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf38Q8BI21 Peli2-204ENSMUST00000226513 1320 ntBASIC24.06■■□□□ 1.44
Rnf38Q8BI21 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf38Q8BI21 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf38Q8BI21 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf38Q8BI21 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.05■■□□□ 1.44
Rnf38Q8BI21 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf38Q8BI21 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf38Q8BI21 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf38Q8BI21 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf38Q8BI21 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf38Q8BI21 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf38Q8BI21 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf38Q8BI21 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf38Q8BI21 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf38Q8BI21 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms