Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Usp6nlQ80XC3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Usp6nlQ80XC3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.73■■■□□ 2.19
Usp6nlQ80XC3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Usp6nlQ80XC3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.72■■■□□ 2.19
Usp6nlQ80XC3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Usp6nlQ80XC3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Usp6nlQ80XC3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Usp6nlQ80XC3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Usp6nlQ80XC3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Usp6nlQ80XC3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.69■■■□□ 2.18
Usp6nlQ80XC3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.68■■■□□ 2.18
Usp6nlQ80XC3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Usp6nlQ80XC3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Usp6nlQ80XC3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Usp6nlQ80XC3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Usp6nlQ80XC3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.66■■■□□ 2.18
Usp6nlQ80XC3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Usp6nlQ80XC3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Usp6nlQ80XC3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Usp6nlQ80XC3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Usp6nlQ80XC3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.59■■■□□ 2.17
Usp6nlQ80XC3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.58■■■□□ 2.17
Usp6nlQ80XC3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Usp6nlQ80XC3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Usp6nlQ80XC3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Usp6nlQ80XC3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.52■■■□□ 2.16
Usp6nlQ80XC3 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.52■■■□□ 2.16
Usp6nlQ80XC3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Usp6nlQ80XC3 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.51■■■□□ 2.15
Usp6nlQ80XC3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Usp6nlQ80XC3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Usp6nlQ80XC3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Usp6nlQ80XC3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Usp6nlQ80XC3 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.46■■■□□ 2.15
Usp6nlQ80XC3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Usp6nlQ80XC3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
Usp6nlQ80XC3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Usp6nlQ80XC3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Usp6nlQ80XC3 Gm8503-201ENSMUST00000118131 455 ntBASIC28.43■■■□□ 2.14
Usp6nlQ80XC3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Usp6nlQ80XC3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Usp6nlQ80XC3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.4■■■□□ 2.14
Usp6nlQ80XC3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Usp6nlQ80XC3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.38■■■□□ 2.13
Usp6nlQ80XC3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Usp6nlQ80XC3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Usp6nlQ80XC3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Usp6nlQ80XC3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Usp6nlQ80XC3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Usp6nlQ80XC3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Usp6nlQ80XC3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.31■■■□□ 2.12
Usp6nlQ80XC3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Usp6nlQ80XC3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Usp6nlQ80XC3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Usp6nlQ80XC3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Usp6nlQ80XC3 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.29■■■□□ 2.12
Usp6nlQ80XC3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Usp6nlQ80XC3 Gm6821-201ENSMUST00000107540 542 ntBASIC28.28■■■□□ 2.12
Usp6nlQ80XC3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.28■■■□□ 2.12
Usp6nlQ80XC3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Usp6nlQ80XC3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Usp6nlQ80XC3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Usp6nlQ80XC3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Usp6nlQ80XC3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Usp6nlQ80XC3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Usp6nlQ80XC3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Usp6nlQ80XC3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Usp6nlQ80XC3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Usp6nlQ80XC3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Usp6nlQ80XC3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Usp6nlQ80XC3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.21■■■□□ 2.11
Usp6nlQ80XC3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.21■■■□□ 2.11
Usp6nlQ80XC3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Usp6nlQ80XC3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Usp6nlQ80XC3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Usp6nlQ80XC3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Usp6nlQ80XC3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
Usp6nlQ80XC3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Usp6nlQ80XC3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Usp6nlQ80XC3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Usp6nlQ80XC3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Usp6nlQ80XC3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Usp6nlQ80XC3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Usp6nlQ80XC3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Usp6nlQ80XC3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Usp6nlQ80XC3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Usp6nlQ80XC3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Usp6nlQ80XC3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Usp6nlQ80XC3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Usp6nlQ80XC3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Usp6nlQ80XC3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Usp6nlQ80XC3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms