Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Vrk1Q80X41 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Vrk1Q80X41 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Vrk1Q80X41 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.48■■□□□ 1.51
Vrk1Q80X41 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.46■■□□□ 1.51
Vrk1Q80X41 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Vrk1Q80X41 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Vrk1Q80X41 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Vrk1Q80X41 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Vrk1Q80X41 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Vrk1Q80X41 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vrk1Q80X41 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
Vrk1Q80X41 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vrk1Q80X41 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Vrk1Q80X41 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.41■■□□□ 1.5
Vrk1Q80X41 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.41■■□□□ 1.5
Vrk1Q80X41 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vrk1Q80X41 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vrk1Q80X41 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vrk1Q80X41 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vrk1Q80X41 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Vrk1Q80X41 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Vrk1Q80X41 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.36■■□□□ 1.49
Vrk1Q80X41 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vrk1Q80X41 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Vrk1Q80X41 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vrk1Q80X41 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
Vrk1Q80X41 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.31■■□□□ 1.48
Vrk1Q80X41 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vrk1Q80X41 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Vrk1Q80X41 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vrk1Q80X41 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Vrk1Q80X41 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vrk1Q80X41 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vrk1Q80X41 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Vrk1Q80X41 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Vrk1Q80X41 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.22■■□□□ 1.47
Vrk1Q80X41 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vrk1Q80X41 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vrk1Q80X41 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vrk1Q80X41 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vrk1Q80X41 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.18■■□□□ 1.46
Vrk1Q80X41 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Vrk1Q80X41 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.17■■□□□ 1.46
Vrk1Q80X41 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Vrk1Q80X41 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vrk1Q80X41 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Vrk1Q80X41 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.15■■□□□ 1.46
Vrk1Q80X41 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vrk1Q80X41 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Vrk1Q80X41 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
Vrk1Q80X41 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vrk1Q80X41 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Vrk1Q80X41 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vrk1Q80X41 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.12■■□□□ 1.45
Vrk1Q80X41 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Vrk1Q80X41 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Vrk1Q80X41 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Vrk1Q80X41 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vrk1Q80X41 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Vrk1Q80X41 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.1■■□□□ 1.45
Vrk1Q80X41 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Vrk1Q80X41 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Vrk1Q80X41 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.07■■□□□ 1.44
Vrk1Q80X41 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vrk1Q80X41 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vrk1Q80X41 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vrk1Q80X41 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vrk1Q80X41 Gm8503-201ENSMUST00000118131 455 ntBASIC24.05■■□□□ 1.44
Vrk1Q80X41 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Vrk1Q80X41 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vrk1Q80X41 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vrk1Q80X41 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Vrk1Q80X41 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.04■■□□□ 1.44
Vrk1Q80X41 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.04■■□□□ 1.44
Vrk1Q80X41 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vrk1Q80X41 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Vrk1Q80X41 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Vrk1Q80X41 Gm6821-201ENSMUST00000107540 542 ntBASIC24.01■■□□□ 1.43
Vrk1Q80X41 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
Vrk1Q80X41 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Vrk1Q80X41 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24■■□□□ 1.43
Vrk1Q80X41 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Vrk1Q80X41 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.99■■□□□ 1.43
Vrk1Q80X41 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Vrk1Q80X41 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Vrk1Q80X41 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.98■■□□□ 1.43
Vrk1Q80X41 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vrk1Q80X41 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Vrk1Q80X41 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Vrk1Q80X41 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Vrk1Q80X41 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Vrk1Q80X41 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vrk1Q80X41 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vrk1Q80X41 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.94■■□□□ 1.42
Vrk1Q80X41 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vrk1Q80X41 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Vrk1Q80X41 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Vrk1Q80X41 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Vrk1Q80X41 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms