Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pif1Q80SX8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pif1Q80SX8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pif1Q80SX8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.57■■□□□ 1.36
Pif1Q80SX8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pif1Q80SX8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.56■■□□□ 1.36
Pif1Q80SX8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Pif1Q80SX8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pif1Q80SX8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pif1Q80SX8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pif1Q80SX8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pif1Q80SX8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pif1Q80SX8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pif1Q80SX8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Pif1Q80SX8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pif1Q80SX8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Pif1Q80SX8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Pif1Q80SX8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
Pif1Q80SX8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pif1Q80SX8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pif1Q80SX8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pif1Q80SX8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.45■■□□□ 1.34
Pif1Q80SX8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pif1Q80SX8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.45■■□□□ 1.34
Pif1Q80SX8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pif1Q80SX8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pif1Q80SX8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pif1Q80SX8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pif1Q80SX8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.41■■□□□ 1.34
Pif1Q80SX8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pif1Q80SX8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pif1Q80SX8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pif1Q80SX8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pif1Q80SX8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pif1Q80SX8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pif1Q80SX8 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.37■■□□□ 1.33
Pif1Q80SX8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
Pif1Q80SX8 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.35■■□□□ 1.33
Pif1Q80SX8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.35■■□□□ 1.33
Pif1Q80SX8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Pif1Q80SX8 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.33■■□□□ 1.33
Pif1Q80SX8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.32■■□□□ 1.32
Pif1Q80SX8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pif1Q80SX8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pif1Q80SX8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pif1Q80SX8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Pif1Q80SX8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Pif1Q80SX8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pif1Q80SX8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pif1Q80SX8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pif1Q80SX8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pif1Q80SX8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Pif1Q80SX8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pif1Q80SX8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pif1Q80SX8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.23■■□□□ 1.31
Pif1Q80SX8 Gm8503-201ENSMUST00000118131 455 ntBASIC23.23■■□□□ 1.31
Pif1Q80SX8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pif1Q80SX8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pif1Q80SX8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pif1Q80SX8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Pif1Q80SX8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pif1Q80SX8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pif1Q80SX8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.21■■□□□ 1.31
Pif1Q80SX8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pif1Q80SX8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pif1Q80SX8 Gm6821-201ENSMUST00000107540 542 ntBASIC23.2■■□□□ 1.3
Pif1Q80SX8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.19■■□□□ 1.3
Pif1Q80SX8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pif1Q80SX8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pif1Q80SX8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pif1Q80SX8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pif1Q80SX8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pif1Q80SX8 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.16■■□□□ 1.3
Pif1Q80SX8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pif1Q80SX8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Pif1Q80SX8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Pif1Q80SX8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pif1Q80SX8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pif1Q80SX8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pif1Q80SX8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Pif1Q80SX8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pif1Q80SX8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pif1Q80SX8 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.13■■□□□ 1.29
Pif1Q80SX8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pif1Q80SX8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.12■■□□□ 1.29
Pif1Q80SX8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pif1Q80SX8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pif1Q80SX8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.1■■□□□ 1.29
Pif1Q80SX8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pif1Q80SX8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pif1Q80SX8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pif1Q80SX8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.09■■□□□ 1.29
Pif1Q80SX8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Pif1Q80SX8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pif1Q80SX8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.07■■□□□ 1.28
Pif1Q80SX8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pif1Q80SX8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pif1Q80SX8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pif1Q80SX8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pif1Q80SX8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms