Protein–RNA interactions for Protein: Q6PHZ8

Kcnip4, Kv channel-interacting protein 4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnip4Q6PHZ8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Kcnip4Q6PHZ8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Kcnip4Q6PHZ8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnip4Q6PHZ8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnip4Q6PHZ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Kcnip4Q6PHZ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.79■□□□□ 0.76
Kcnip4Q6PHZ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnip4Q6PHZ8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnip4Q6PHZ8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnip4Q6PHZ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.77■□□□□ 0.75
Kcnip4Q6PHZ8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Kcnip4Q6PHZ8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Kcnip4Q6PHZ8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnip4Q6PHZ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Kcnip4Q6PHZ8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Kcnip4Q6PHZ8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnip4Q6PHZ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnip4Q6PHZ8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnip4Q6PHZ8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnip4Q6PHZ8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnip4Q6PHZ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.7■□□□□ 0.74
Kcnip4Q6PHZ8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnip4Q6PHZ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Kcnip4Q6PHZ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnip4Q6PHZ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnip4Q6PHZ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnip4Q6PHZ8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnip4Q6PHZ8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Kcnip4Q6PHZ8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnip4Q6PHZ8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Kcnip4Q6PHZ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip4Q6PHZ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip4Q6PHZ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip4Q6PHZ8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip4Q6PHZ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip4Q6PHZ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Kcnip4Q6PHZ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Kcnip4Q6PHZ8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcnip4Q6PHZ8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcnip4Q6PHZ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.62■□□□□ 0.73
Kcnip4Q6PHZ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcnip4Q6PHZ8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Kcnip4Q6PHZ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Kcnip4Q6PHZ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Kcnip4Q6PHZ8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Kcnip4Q6PHZ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Kcnip4Q6PHZ8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Kcnip4Q6PHZ8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Kcnip4Q6PHZ8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Kcnip4Q6PHZ8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Kcnip4Q6PHZ8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Kcnip4Q6PHZ8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Kcnip4Q6PHZ8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.56■□□□□ 0.72
Kcnip4Q6PHZ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Kcnip4Q6PHZ8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Kcnip4Q6PHZ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.55■□□□□ 0.72
Kcnip4Q6PHZ8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
Kcnip4Q6PHZ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.54■□□□□ 0.72
Kcnip4Q6PHZ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kcnip4Q6PHZ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Kcnip4Q6PHZ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.53■□□□□ 0.72
Kcnip4Q6PHZ8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Kcnip4Q6PHZ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kcnip4Q6PHZ8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Kcnip4Q6PHZ8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Kcnip4Q6PHZ8 Gm27325-201ENSMUST00000175467 74 ntBASIC19.5■□□□□ 0.71
Kcnip4Q6PHZ8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Kcnip4Q6PHZ8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Kcnip4Q6PHZ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Kcnip4Q6PHZ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Kcnip4Q6PHZ8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kcnip4Q6PHZ8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Kcnip4Q6PHZ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.46■□□□□ 0.71
Kcnip4Q6PHZ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Kcnip4Q6PHZ8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Kcnip4Q6PHZ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Kcnip4Q6PHZ8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Kcnip4Q6PHZ8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnip4Q6PHZ8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Kcnip4Q6PHZ8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Kcnip4Q6PHZ8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Kcnip4Q6PHZ8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnip4Q6PHZ8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Kcnip4Q6PHZ8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Kcnip4Q6PHZ8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kcnip4Q6PHZ8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Kcnip4Q6PHZ8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Kcnip4Q6PHZ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Kcnip4Q6PHZ8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnip4Q6PHZ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnip4Q6PHZ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Kcnip4Q6PHZ8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Kcnip4Q6PHZ8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Kcnip4Q6PHZ8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnip4Q6PHZ8 Gm25238-201ENSMUST00000174914 89 ntBASIC19.38■□□□□ 0.69
Kcnip4Q6PHZ8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnip4Q6PHZ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnip4Q6PHZ8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.37■□□□□ 0.69
Kcnip4Q6PHZ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.37■□□□□ 0.69
Kcnip4Q6PHZ8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms