Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sqstm1Q64337 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.38■■□□□ 1.17
Sqstm1Q64337 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Sqstm1Q64337 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sqstm1Q64337 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sqstm1Q64337 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sqstm1Q64337 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sqstm1Q64337 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sqstm1Q64337 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Sqstm1Q64337 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sqstm1Q64337 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sqstm1Q64337 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.36■■□□□ 1.17
Sqstm1Q64337 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sqstm1Q64337 Mipep-204ENSMUST00000225043 1548 ntBASIC22.35■■□□□ 1.17
Sqstm1Q64337 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sqstm1Q64337 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sqstm1Q64337 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Sqstm1Q64337 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sqstm1Q64337 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Sqstm1Q64337 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.31■■□□□ 1.16
Sqstm1Q64337 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.31■■□□□ 1.16
Sqstm1Q64337 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sqstm1Q64337 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sqstm1Q64337 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sqstm1Q64337 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sqstm1Q64337 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sqstm1Q64337 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Sqstm1Q64337 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sqstm1Q64337 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sqstm1Q64337 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sqstm1Q64337 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.28■■□□□ 1.16
Sqstm1Q64337 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sqstm1Q64337 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.26■■□□□ 1.15
Sqstm1Q64337 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sqstm1Q64337 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sqstm1Q64337 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sqstm1Q64337 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.25■■□□□ 1.15
Sqstm1Q64337 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sqstm1Q64337 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sqstm1Q64337 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sqstm1Q64337 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sqstm1Q64337 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sqstm1Q64337 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sqstm1Q64337 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sqstm1Q64337 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.22■■□□□ 1.15
Sqstm1Q64337 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sqstm1Q64337 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Sqstm1Q64337 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sqstm1Q64337 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sqstm1Q64337 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sqstm1Q64337 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.19■■□□□ 1.14
Sqstm1Q64337 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sqstm1Q64337 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sqstm1Q64337 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sqstm1Q64337 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sqstm1Q64337 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sqstm1Q64337 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sqstm1Q64337 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.17■■□□□ 1.14
Sqstm1Q64337 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sqstm1Q64337 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Sqstm1Q64337 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sqstm1Q64337 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.13■■□□□ 1.13
Sqstm1Q64337 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sqstm1Q64337 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sqstm1Q64337 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Sqstm1Q64337 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sqstm1Q64337 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sqstm1Q64337 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sqstm1Q64337 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sqstm1Q64337 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.1■■□□□ 1.13
Sqstm1Q64337 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sqstm1Q64337 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sqstm1Q64337 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sqstm1Q64337 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sqstm1Q64337 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Sqstm1Q64337 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sqstm1Q64337 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sqstm1Q64337 Rab21-202ENSMUST00000218831 843 ntBASIC22.06■■□□□ 1.12
Sqstm1Q64337 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sqstm1Q64337 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sqstm1Q64337 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sqstm1Q64337 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Sqstm1Q64337 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Sqstm1Q64337 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22■■□□□ 1.11
Sqstm1Q64337 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22■■□□□ 1.11
Sqstm1Q64337 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Sqstm1Q64337 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sqstm1Q64337 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sqstm1Q64337 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Sqstm1Q64337 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sqstm1Q64337 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sqstm1Q64337 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Sqstm1Q64337 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sqstm1Q64337 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Sqstm1Q64337 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sqstm1Q64337 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sqstm1Q64337 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sqstm1Q64337 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Sqstm1Q64337 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sqstm1Q64337 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms