Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxc2Q61850 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxc2Q61850 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Foxc2Q61850 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxc2Q61850 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxc2Q61850 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Foxc2Q61850 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.57■□□□□ 0.72
Foxc2Q61850 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Foxc2Q61850 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Foxc2Q61850 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Foxc2Q61850 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.55■□□□□ 0.72
Foxc2Q61850 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.55■□□□□ 0.72
Foxc2Q61850 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Foxc2Q61850 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.54■□□□□ 0.72
Foxc2Q61850 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Foxc2Q61850 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxc2Q61850 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxc2Q61850 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.53■□□□□ 0.72
Foxc2Q61850 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxc2Q61850 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.52■□□□□ 0.72
Foxc2Q61850 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Foxc2Q61850 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.51■□□□□ 0.71
Foxc2Q61850 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxc2Q61850 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxc2Q61850 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.5■□□□□ 0.71
Foxc2Q61850 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxc2Q61850 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Foxc2Q61850 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Foxc2Q61850 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxc2Q61850 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxc2Q61850 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxc2Q61850 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
Foxc2Q61850 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Foxc2Q61850 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Foxc2Q61850 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Foxc2Q61850 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxc2Q61850 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxc2Q61850 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxc2Q61850 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxc2Q61850 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxc2Q61850 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.43■□□□□ 0.7
Foxc2Q61850 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.43■□□□□ 0.7
Foxc2Q61850 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Foxc2Q61850 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxc2Q61850 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Foxc2Q61850 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Foxc2Q61850 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxc2Q61850 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxc2Q61850 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.39■□□□□ 0.69
Foxc2Q61850 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxc2Q61850 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxc2Q61850 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxc2Q61850 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxc2Q61850 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Foxc2Q61850 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxc2Q61850 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxc2Q61850 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxc2Q61850 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Foxc2Q61850 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxc2Q61850 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxc2Q61850 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxc2Q61850 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxc2Q61850 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Foxc2Q61850 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxc2Q61850 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxc2Q61850 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxc2Q61850 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxc2Q61850 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxc2Q61850 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxc2Q61850 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Foxc2Q61850 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxc2Q61850 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxc2Q61850 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Foxc2Q61850 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Foxc2Q61850 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc2Q61850 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.25■□□□□ 0.67
Foxc2Q61850 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxc2Q61850 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Foxc2Q61850 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.23■□□□□ 0.67
Foxc2Q61850 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Foxc2Q61850 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Foxc2Q61850 Gm45855-201ENSMUST00000212546 880 ntBASIC19.22■□□□□ 0.67
Foxc2Q61850 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms