Protein–RNA interactions for Protein: Q4KL78

Khdc1c, KH homology domain-containing protein 1C, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1cQ4KL78 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc1cQ4KL78 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.55■□□□□ 0.56
Khdc1cQ4KL78 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc1cQ4KL78 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc1cQ4KL78 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Khdc1cQ4KL78 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc1cQ4KL78 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc1cQ4KL78 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc1cQ4KL78 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Khdc1cQ4KL78 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Khdc1cQ4KL78 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Khdc1cQ4KL78 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc1cQ4KL78 Amer2-203ENSMUST00000225247 2662 ntBASIC18.5■□□□□ 0.55
Khdc1cQ4KL78 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc1cQ4KL78 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc1cQ4KL78 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.49■□□□□ 0.55
Khdc1cQ4KL78 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc1cQ4KL78 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc1cQ4KL78 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc1cQ4KL78 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Khdc1cQ4KL78 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc1cQ4KL78 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Khdc1cQ4KL78 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc1cQ4KL78 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc1cQ4KL78 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc1cQ4KL78 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1cQ4KL78 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1cQ4KL78 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1cQ4KL78 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1cQ4KL78 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1cQ4KL78 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1cQ4KL78 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1cQ4KL78 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1cQ4KL78 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Khdc1cQ4KL78 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Khdc1cQ4KL78 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc1cQ4KL78 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc1cQ4KL78 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Khdc1cQ4KL78 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1cQ4KL78 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1cQ4KL78 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1cQ4KL78 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1cQ4KL78 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1cQ4KL78 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1cQ4KL78 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc1cQ4KL78 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc1cQ4KL78 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Khdc1cQ4KL78 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Khdc1cQ4KL78 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc1cQ4KL78 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc1cQ4KL78 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc1cQ4KL78 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc1cQ4KL78 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc1cQ4KL78 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1cQ4KL78 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.29■□□□□ 0.52
Khdc1cQ4KL78 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1cQ4KL78 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.29■□□□□ 0.52
Khdc1cQ4KL78 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1cQ4KL78 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc1cQ4KL78 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Khdc1cQ4KL78 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Khdc1cQ4KL78 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc1cQ4KL78 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc1cQ4KL78 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc1cQ4KL78 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1cQ4KL78 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1cQ4KL78 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Khdc1cQ4KL78 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.25■□□□□ 0.51
Khdc1cQ4KL78 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc1cQ4KL78 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc1cQ4KL78 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.24■□□□□ 0.51
Khdc1cQ4KL78 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc1cQ4KL78 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.24■□□□□ 0.51
Khdc1cQ4KL78 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Khdc1cQ4KL78 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc1cQ4KL78 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc1cQ4KL78 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.23■□□□□ 0.51
Khdc1cQ4KL78 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Khdc1cQ4KL78 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc1cQ4KL78 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc1cQ4KL78 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Khdc1cQ4KL78 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Khdc1cQ4KL78 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.21■□□□□ 0.51
Khdc1cQ4KL78 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc1cQ4KL78 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc1cQ4KL78 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Khdc1cQ4KL78 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.19■□□□□ 0.5
Khdc1cQ4KL78 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc1cQ4KL78 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Khdc1cQ4KL78 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc1cQ4KL78 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc1cQ4KL78 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc1cQ4KL78 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc1cQ4KL78 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Khdc1cQ4KL78 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.16■□□□□ 0.5
Khdc1cQ4KL78 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc1cQ4KL78 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc1cQ4KL78 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc1cQ4KL78 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc1cQ4KL78 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms