Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cul4aQ3TCH7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.78■■□□□ 1.88
Cul4aQ3TCH7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cul4aQ3TCH7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.78■■□□□ 1.88
Cul4aQ3TCH7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Cul4aQ3TCH7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cul4aQ3TCH7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Cul4aQ3TCH7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cul4aQ3TCH7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Cul4aQ3TCH7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.75■■□□□ 1.87
Cul4aQ3TCH7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
Cul4aQ3TCH7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Cul4aQ3TCH7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.74■■□□□ 1.87
Cul4aQ3TCH7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.74■■□□□ 1.87
Cul4aQ3TCH7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cul4aQ3TCH7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Cul4aQ3TCH7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Cul4aQ3TCH7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cul4aQ3TCH7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cul4aQ3TCH7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cul4aQ3TCH7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cul4aQ3TCH7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cul4aQ3TCH7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cul4aQ3TCH7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cul4aQ3TCH7 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.68■■□□□ 1.86
Cul4aQ3TCH7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cul4aQ3TCH7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cul4aQ3TCH7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Cul4aQ3TCH7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cul4aQ3TCH7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cul4aQ3TCH7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cul4aQ3TCH7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Cul4aQ3TCH7 Amer2-203ENSMUST00000225247 2662 ntBASIC26.61■■□□□ 1.85
Cul4aQ3TCH7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cul4aQ3TCH7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Cul4aQ3TCH7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cul4aQ3TCH7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cul4aQ3TCH7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cul4aQ3TCH7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.58■■□□□ 1.84
Cul4aQ3TCH7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cul4aQ3TCH7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.56■■□□□ 1.84
Cul4aQ3TCH7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cul4aQ3TCH7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cul4aQ3TCH7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cul4aQ3TCH7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cul4aQ3TCH7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cul4aQ3TCH7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Cul4aQ3TCH7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.51■■□□□ 1.83
Cul4aQ3TCH7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cul4aQ3TCH7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Cul4aQ3TCH7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cul4aQ3TCH7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.5■■□□□ 1.83
Cul4aQ3TCH7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cul4aQ3TCH7 Peli2-204ENSMUST00000226513 1320 ntBASIC26.5■■□□□ 1.83
Cul4aQ3TCH7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cul4aQ3TCH7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cul4aQ3TCH7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
Cul4aQ3TCH7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cul4aQ3TCH7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cul4aQ3TCH7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cul4aQ3TCH7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cul4aQ3TCH7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cul4aQ3TCH7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Cul4aQ3TCH7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Cul4aQ3TCH7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cul4aQ3TCH7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cul4aQ3TCH7 Gm26115-201ENSMUST00000175605 87 ntBASIC26.42■■□□□ 1.82
Cul4aQ3TCH7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cul4aQ3TCH7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cul4aQ3TCH7 Gm8109-201ENSMUST00000194076 746 ntBASIC26.41■■□□□ 1.82
Cul4aQ3TCH7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cul4aQ3TCH7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Cul4aQ3TCH7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.39■■□□□ 1.82
Cul4aQ3TCH7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cul4aQ3TCH7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Cul4aQ3TCH7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cul4aQ3TCH7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.36■■□□□ 1.81
Cul4aQ3TCH7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cul4aQ3TCH7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Cul4aQ3TCH7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Cul4aQ3TCH7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cul4aQ3TCH7 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.35■■□□□ 1.81
Cul4aQ3TCH7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cul4aQ3TCH7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cul4aQ3TCH7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cul4aQ3TCH7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cul4aQ3TCH7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cul4aQ3TCH7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cul4aQ3TCH7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cul4aQ3TCH7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.31■■□□□ 1.8
Cul4aQ3TCH7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.3■■□□□ 1.8
Cul4aQ3TCH7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Cul4aQ3TCH7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cul4aQ3TCH7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cul4aQ3TCH7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cul4aQ3TCH7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cul4aQ3TCH7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cul4aQ3TCH7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.27■■□□□ 1.8
Cul4aQ3TCH7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cul4aQ3TCH7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms