Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SgcbP82349 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.6■■□□□ 1.21
SgcbP82349 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.6■■□□□ 1.21
SgcbP82349 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SgcbP82349 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SgcbP82349 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SgcbP82349 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SgcbP82349 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SgcbP82349 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SgcbP82349 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SgcbP82349 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.56■■□□□ 1.2
SgcbP82349 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SgcbP82349 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SgcbP82349 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SgcbP82349 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SgcbP82349 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SgcbP82349 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SgcbP82349 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SgcbP82349 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SgcbP82349 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SgcbP82349 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SgcbP82349 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SgcbP82349 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SgcbP82349 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SgcbP82349 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SgcbP82349 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SgcbP82349 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SgcbP82349 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SgcbP82349 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SgcbP82349 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SgcbP82349 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SgcbP82349 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SgcbP82349 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SgcbP82349 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SgcbP82349 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SgcbP82349 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SgcbP82349 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.39■■□□□ 1.17
SgcbP82349 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SgcbP82349 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SgcbP82349 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SgcbP82349 Gm45855-201ENSMUST00000212546 880 ntBASIC22.37■■□□□ 1.17
SgcbP82349 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SgcbP82349 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SgcbP82349 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SgcbP82349 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SgcbP82349 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SgcbP82349 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.32■■□□□ 1.16
SgcbP82349 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SgcbP82349 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SgcbP82349 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SgcbP82349 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SgcbP82349 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
SgcbP82349 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SgcbP82349 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.3■■□□□ 1.16
SgcbP82349 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
SgcbP82349 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.29■■□□□ 1.16
SgcbP82349 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SgcbP82349 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
SgcbP82349 Gm9397-201ENSMUST00000200125 605 ntBASIC22.28■■□□□ 1.16
SgcbP82349 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SgcbP82349 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SgcbP82349 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SgcbP82349 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SgcbP82349 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
SgcbP82349 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SgcbP82349 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SgcbP82349 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.23■■□□□ 1.15
SgcbP82349 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SgcbP82349 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SgcbP82349 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.21■■□□□ 1.15
SgcbP82349 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SgcbP82349 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.21■■□□□ 1.15
SgcbP82349 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SgcbP82349 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SgcbP82349 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SgcbP82349 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SgcbP82349 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SgcbP82349 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SgcbP82349 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
SgcbP82349 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SgcbP82349 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SgcbP82349 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SgcbP82349 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SgcbP82349 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SgcbP82349 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SgcbP82349 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SgcbP82349 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
SgcbP82349 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.15■■□□□ 1.14
SgcbP82349 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SgcbP82349 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.15■■□□□ 1.14
SgcbP82349 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SgcbP82349 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SgcbP82349 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SgcbP82349 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.14■■□□□ 1.13
SgcbP82349 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SgcbP82349 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SgcbP82349 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SgcbP82349 Gm24970-201ENSMUST00000175582 82 ntBASIC22.12■■□□□ 1.13
SgcbP82349 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SgcbP82349 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms