Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne2P59108 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.84■□□□□ 0.93
Cpne2P59108 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cpne2P59108 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpne2P59108 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpne2P59108 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cpne2P59108 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpne2P59108 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.83■□□□□ 0.93
Cpne2P59108 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.83■□□□□ 0.92
Cpne2P59108 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne2P59108 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cpne2P59108 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne2P59108 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne2P59108 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne2P59108 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne2P59108 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne2P59108 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cpne2P59108 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cpne2P59108 Gm27322-201ENSMUST00000184007 104 ntBASIC20.79■□□□□ 0.92
Cpne2P59108 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cpne2P59108 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne2P59108 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne2P59108 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne2P59108 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne2P59108 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.91
Cpne2P59108 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Cpne2P59108 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne2P59108 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.75■□□□□ 0.91
Cpne2P59108 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne2P59108 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.74■□□□□ 0.91
Cpne2P59108 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpne2P59108 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.73■□□□□ 0.91
Cpne2P59108 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Cpne2P59108 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpne2P59108 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne2P59108 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne2P59108 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne2P59108 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne2P59108 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cpne2P59108 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cpne2P59108 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne2P59108 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne2P59108 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne2P59108 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne2P59108 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne2P59108 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cpne2P59108 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne2P59108 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne2P59108 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne2P59108 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne2P59108 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne2P59108 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Cpne2P59108 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpne2P59108 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cpne2P59108 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cpne2P59108 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cpne2P59108 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne2P59108 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne2P59108 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne2P59108 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne2P59108 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne2P59108 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cpne2P59108 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne2P59108 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne2P59108 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cpne2P59108 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cpne2P59108 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne2P59108 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne2P59108 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne2P59108 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne2P59108 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne2P59108 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.58■□□□□ 0.89
Cpne2P59108 Amer2-203ENSMUST00000225247 2662 ntBASIC20.58■□□□□ 0.89
Cpne2P59108 Gm26115-201ENSMUST00000175605 87 ntBASIC20.58■□□□□ 0.89
Cpne2P59108 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpne2P59108 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cpne2P59108 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpne2P59108 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne2P59108 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne2P59108 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne2P59108 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne2P59108 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cpne2P59108 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne2P59108 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne2P59108 Gm8109-201ENSMUST00000194076 746 ntBASIC20.54■□□□□ 0.88
Cpne2P59108 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.52■□□□□ 0.88
Cpne2P59108 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne2P59108 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.52■□□□□ 0.88
Cpne2P59108 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne2P59108 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpne2P59108 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpne2P59108 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne2P59108 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpne2P59108 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpne2P59108 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.5■□□□□ 0.87
Cpne2P59108 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne2P59108 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cpne2P59108 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.48■□□□□ 0.87
Cpne2P59108 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpne2P59108 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms