Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rom1P32958 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rom1P32958 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.92■□□□□ 0.78
Rom1P32958 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rom1P32958 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rom1P32958 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rom1P32958 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rom1P32958 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rom1P32958 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rom1P32958 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rom1P32958 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rom1P32958 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.88■□□□□ 0.77
Rom1P32958 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rom1P32958 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rom1P32958 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.86■□□□□ 0.77
Rom1P32958 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rom1P32958 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rom1P32958 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rom1P32958 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rom1P32958 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rom1P32958 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rom1P32958 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rom1P32958 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rom1P32958 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rom1P32958 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rom1P32958 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rom1P32958 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rom1P32958 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rom1P32958 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rom1P32958 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rom1P32958 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.76■□□□□ 0.75
Rom1P32958 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rom1P32958 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rom1P32958 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rom1P32958 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rom1P32958 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.73■□□□□ 0.75
Rom1P32958 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rom1P32958 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rom1P32958 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rom1P32958 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rom1P32958 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rom1P32958 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rom1P32958 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rom1P32958 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rom1P32958 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rom1P32958 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rom1P32958 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rom1P32958 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rom1P32958 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rom1P32958 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rom1P32958 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.67■□□□□ 0.74
Rom1P32958 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rom1P32958 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rom1P32958 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rom1P32958 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rom1P32958 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rom1P32958 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rom1P32958 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rom1P32958 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rom1P32958 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.64■□□□□ 0.73
Rom1P32958 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.64■□□□□ 0.73
Rom1P32958 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rom1P32958 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rom1P32958 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rom1P32958 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.62■□□□□ 0.73
Rom1P32958 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rom1P32958 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Rom1P32958 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rom1P32958 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rom1P32958 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Rom1P32958 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Rom1P32958 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rom1P32958 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.56■□□□□ 0.72
Rom1P32958 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
Rom1P32958 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rom1P32958 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Rom1P32958 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rom1P32958 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rom1P32958 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rom1P32958 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms