Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tnfrsf9P20334 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.37■□□□□ 0.85
Tnfrsf9P20334 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.36■□□□□ 0.85
Tnfrsf9P20334 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf9P20334 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf9P20334 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf9P20334 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Tnfrsf9P20334 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.31■□□□□ 0.84
Tnfrsf9P20334 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf9P20334 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf9P20334 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.29■□□□□ 0.84
Tnfrsf9P20334 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.28■□□□□ 0.84
Tnfrsf9P20334 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf9P20334 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.26■□□□□ 0.83
Tnfrsf9P20334 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf9P20334 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf9P20334 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf9P20334 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf9P20334 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.23■□□□□ 0.83
Tnfrsf9P20334 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf9P20334 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Tnfrsf9P20334 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.2■□□□□ 0.82
Tnfrsf9P20334 Gm24970-201ENSMUST00000175582 82 ntBASIC20.2■□□□□ 0.82
Tnfrsf9P20334 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf9P20334 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf9P20334 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf9P20334 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf9P20334 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf9P20334 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf9P20334 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf9P20334 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf9P20334 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf9P20334 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf9P20334 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf9P20334 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf9P20334 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf9P20334 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf9P20334 Gm8503-201ENSMUST00000118131 455 ntBASIC20.11■□□□□ 0.81
Tnfrsf9P20334 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.11■□□□□ 0.81
Tnfrsf9P20334 Gm6821-201ENSMUST00000107540 542 ntBASIC20.1■□□□□ 0.81
Tnfrsf9P20334 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf9P20334 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.08■□□□□ 0.81
Tnfrsf9P20334 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tnfrsf9P20334 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.08■□□□□ 0.81
Tnfrsf9P20334 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf9P20334 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf9P20334 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf9P20334 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Tnfrsf9P20334 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfrsf9P20334 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.03■□□□□ 0.8
Tnfrsf9P20334 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf9P20334 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf9P20334 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Tnfrsf9P20334 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf9P20334 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf9P20334 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20■□□□□ 0.79
Tnfrsf9P20334 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.99■□□□□ 0.79
Tnfrsf9P20334 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf9P20334 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfrsf9P20334 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Tnfrsf9P20334 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf9P20334 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Tnfrsf9P20334 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf9P20334 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf9P20334 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.91■□□□□ 0.78
Tnfrsf9P20334 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.91■□□□□ 0.78
Tnfrsf9P20334 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf9P20334 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tnfrsf9P20334 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf9P20334 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf9P20334 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf9P20334 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf9P20334 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Tnfrsf9P20334 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf9P20334 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf9P20334 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.85■□□□□ 0.77
Tnfrsf9P20334 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Tnfrsf9P20334 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tnfrsf9P20334 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.84■□□□□ 0.77
Tnfrsf9P20334 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf9P20334 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.84■□□□□ 0.77
Tnfrsf9P20334 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf9P20334 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Tnfrsf9P20334 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf9P20334 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf9P20334 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf9P20334 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf9P20334 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.81■□□□□ 0.76
Tnfrsf9P20334 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.81■□□□□ 0.76
Tnfrsf9P20334 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfrsf9P20334 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Tnfrsf9P20334 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf9P20334 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf9P20334 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Tnfrsf9P20334 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf9P20334 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.78■□□□□ 0.76
Tnfrsf9P20334 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Tnfrsf9P20334 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf9P20334 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf9P20334 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms