Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccl1P10146 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccl1P10146 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl1P10146 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.44■□□□□ 0.7
Ccl1P10146 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl1P10146 Mipep-204ENSMUST00000225043 1548 ntBASIC19.43■□□□□ 0.7
Ccl1P10146 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccl1P10146 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl1P10146 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccl1P10146 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccl1P10146 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl1P10146 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl1P10146 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl1P10146 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl1P10146 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl1P10146 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl1P10146 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl1P10146 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccl1P10146 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccl1P10146 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccl1P10146 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl1P10146 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccl1P10146 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccl1P10146 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl1P10146 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl1P10146 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl1P10146 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl1P10146 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl1P10146 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccl1P10146 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl1P10146 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl1P10146 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl1P10146 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl1P10146 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl1P10146 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ccl1P10146 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccl1P10146 Rab21-202ENSMUST00000218831 843 ntBASIC19.27■□□□□ 0.68
Ccl1P10146 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccl1P10146 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccl1P10146 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.27■□□□□ 0.67
Ccl1P10146 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl1P10146 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl1P10146 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccl1P10146 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ccl1P10146 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccl1P10146 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Ccl1P10146 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl1P10146 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccl1P10146 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl1P10146 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Ccl1P10146 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Ccl1P10146 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.23■□□□□ 0.67
Ccl1P10146 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl1P10146 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccl1P10146 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.22■□□□□ 0.67
Ccl1P10146 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl1P10146 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl1P10146 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccl1P10146 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl1P10146 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccl1P10146 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl1P10146 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl1P10146 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl1P10146 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl1P10146 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl1P10146 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccl1P10146 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.19■□□□□ 0.66
Ccl1P10146 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl1P10146 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl1P10146 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccl1P10146 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccl1P10146 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccl1P10146 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccl1P10146 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl1P10146 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccl1P10146 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccl1P10146 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl1P10146 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccl1P10146 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl1P10146 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccl1P10146 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccl1P10146 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccl1P10146 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccl1P10146 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccl1P10146 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccl1P10146 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl1P10146 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl1P10146 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccl1P10146 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl1P10146 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccl1P10146 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccl1P10146 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl1P10146 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccl1P10146 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccl1P10146 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ccl1P10146 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccl1P10146 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccl1P10146 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccl1P10146 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccl1P10146 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms