Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CfdP03953 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CfdP03953 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CfdP03953 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CfdP03953 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.22■□□□□ 0.99
CfdP03953 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CfdP03953 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CfdP03953 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CfdP03953 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CfdP03953 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CfdP03953 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CfdP03953 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CfdP03953 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CfdP03953 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CfdP03953 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CfdP03953 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CfdP03953 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CfdP03953 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CfdP03953 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CfdP03953 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CfdP03953 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.16■□□□□ 0.98
CfdP03953 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.15■□□□□ 0.98
CfdP03953 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
CfdP03953 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CfdP03953 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CfdP03953 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CfdP03953 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CfdP03953 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.12■□□□□ 0.97
CfdP03953 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CfdP03953 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CfdP03953 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CfdP03953 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CfdP03953 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CfdP03953 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CfdP03953 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.09■□□□□ 0.97
CfdP03953 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CfdP03953 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.08■□□□□ 0.97
CfdP03953 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CfdP03953 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CfdP03953 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CfdP03953 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CfdP03953 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CfdP03953 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CfdP03953 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CfdP03953 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.04■□□□□ 0.96
CfdP03953 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CfdP03953 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CfdP03953 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CfdP03953 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CfdP03953 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CfdP03953 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.02■□□□□ 0.95
CfdP03953 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CfdP03953 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.01■□□□□ 0.95
CfdP03953 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CfdP03953 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CfdP03953 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CfdP03953 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CfdP03953 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CfdP03953 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CfdP03953 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CfdP03953 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CfdP03953 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CfdP03953 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CfdP03953 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CfdP03953 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CfdP03953 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CfdP03953 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CfdP03953 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CfdP03953 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CfdP03953 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CfdP03953 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CfdP03953 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CfdP03953 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CfdP03953 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CfdP03953 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CfdP03953 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CfdP03953 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CfdP03953 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CfdP03953 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CfdP03953 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CfdP03953 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CfdP03953 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CfdP03953 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CfdP03953 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CfdP03953 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CfdP03953 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CfdP03953 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CfdP03953 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CfdP03953 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CfdP03953 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CfdP03953 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CfdP03953 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CfdP03953 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CfdP03953 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CfdP03953 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CfdP03953 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CfdP03953 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.8■□□□□ 0.92
CfdP03953 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.8■□□□□ 0.92
CfdP03953 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CfdP03953 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms