Protein–RNA interactions for Protein: O88676

Mmp23, Matrix metalloproteinase-23, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp23O88676 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp23O88676 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mmp23O88676 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Mmp23O88676 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19■□□□□ 0.63
Mmp23O88676 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp23O88676 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp23O88676 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp23O88676 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp23O88676 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp23O88676 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp23O88676 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.93■□□□□ 0.62
Mmp23O88676 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Mmp23O88676 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp23O88676 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp23O88676 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp23O88676 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.9■□□□□ 0.62
Mmp23O88676 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Mmp23O88676 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.88■□□□□ 0.61
Mmp23O88676 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp23O88676 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp23O88676 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp23O88676 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.86■□□□□ 0.61
Mmp23O88676 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Mmp23O88676 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp23O88676 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp23O88676 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp23O88676 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp23O88676 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp23O88676 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp23O88676 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp23O88676 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.83■□□□□ 0.6
Mmp23O88676 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp23O88676 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp23O88676 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.81■□□□□ 0.6
Mmp23O88676 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp23O88676 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp23O88676 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp23O88676 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp23O88676 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp23O88676 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mmp23O88676 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mmp23O88676 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp23O88676 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp23O88676 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp23O88676 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp23O88676 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp23O88676 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp23O88676 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Mmp23O88676 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp23O88676 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp23O88676 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp23O88676 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp23O88676 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mmp23O88676 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp23O88676 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp23O88676 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp23O88676 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp23O88676 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp23O88676 Gm25238-201ENSMUST00000174914 89 ntBASIC18.71■□□□□ 0.59
Mmp23O88676 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp23O88676 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp23O88676 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp23O88676 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp23O88676 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp23O88676 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.69■□□□□ 0.58
Mmp23O88676 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mmp23O88676 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mmp23O88676 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp23O88676 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp23O88676 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp23O88676 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp23O88676 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp23O88676 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp23O88676 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Mmp23O88676 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp23O88676 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp23O88676 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp23O88676 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp23O88676 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp23O88676 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Mmp23O88676 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp23O88676 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp23O88676 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.59■□□□□ 0.57
Mmp23O88676 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.59■□□□□ 0.57
Mmp23O88676 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp23O88676 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp23O88676 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp23O88676 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp23O88676 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp23O88676 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp23O88676 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp23O88676 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Mmp23O88676 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.55■□□□□ 0.56
Mmp23O88676 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp23O88676 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp23O88676 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp23O88676 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp23O88676 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mmp23O88676 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp23O88676 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms