Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tgfbr3O88393 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tgfbr3O88393 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tgfbr3O88393 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tgfbr3O88393 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.72■■□□□ 1.55
Tgfbr3O88393 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Tgfbr3O88393 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Tgfbr3O88393 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Tgfbr3O88393 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Tgfbr3O88393 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.67■■□□□ 1.54
Tgfbr3O88393 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
Tgfbr3O88393 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.66■■□□□ 1.54
Tgfbr3O88393 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tgfbr3O88393 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tgfbr3O88393 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Tgfbr3O88393 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Tgfbr3O88393 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.64■■□□□ 1.54
Tgfbr3O88393 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Tgfbr3O88393 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Tgfbr3O88393 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.63■■□□□ 1.53
Tgfbr3O88393 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Tgfbr3O88393 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Tgfbr3O88393 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.61■■□□□ 1.53
Tgfbr3O88393 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Tgfbr3O88393 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Tgfbr3O88393 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.6■■□□□ 1.53
Tgfbr3O88393 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Tgfbr3O88393 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.57■■□□□ 1.52
Tgfbr3O88393 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
Tgfbr3O88393 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Tgfbr3O88393 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tgfbr3O88393 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tgfbr3O88393 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tgfbr3O88393 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Tgfbr3O88393 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tgfbr3O88393 Gm8503-201ENSMUST00000118131 455 ntBASIC24.49■■□□□ 1.51
Tgfbr3O88393 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Tgfbr3O88393 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Tgfbr3O88393 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tgfbr3O88393 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Tgfbr3O88393 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tgfbr3O88393 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.46■■□□□ 1.51
Tgfbr3O88393 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.46■■□□□ 1.51
Tgfbr3O88393 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tgfbr3O88393 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Tgfbr3O88393 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tgfbr3O88393 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tgfbr3O88393 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tgfbr3O88393 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tgfbr3O88393 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tgfbr3O88393 Gm6821-201ENSMUST00000107540 542 ntBASIC24.43■■□□□ 1.5
Tgfbr3O88393 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Tgfbr3O88393 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.41■■□□□ 1.5
Tgfbr3O88393 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Tgfbr3O88393 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Tgfbr3O88393 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
Tgfbr3O88393 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Tgfbr3O88393 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.37■■□□□ 1.49
Tgfbr3O88393 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.35■■□□□ 1.49
Tgfbr3O88393 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.35■■□□□ 1.49
Tgfbr3O88393 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tgfbr3O88393 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Tgfbr3O88393 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tgfbr3O88393 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Tgfbr3O88393 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Tgfbr3O88393 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Tgfbr3O88393 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Tgfbr3O88393 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Tgfbr3O88393 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tgfbr3O88393 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Tgfbr3O88393 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Tgfbr3O88393 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Tgfbr3O88393 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Tgfbr3O88393 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Tgfbr3O88393 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tgfbr3O88393 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Tgfbr3O88393 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Tgfbr3O88393 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Tgfbr3O88393 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.27■■□□□ 1.48
Tgfbr3O88393 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tgfbr3O88393 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
Tgfbr3O88393 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tgfbr3O88393 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Tgfbr3O88393 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tgfbr3O88393 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tgfbr3O88393 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tgfbr3O88393 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Tgfbr3O88393 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tgfbr3O88393 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Tgfbr3O88393 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.21■■□□□ 1.47
Tgfbr3O88393 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.21■■□□□ 1.47
Tgfbr3O88393 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Tgfbr3O88393 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Tgfbr3O88393 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Tgfbr3O88393 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Tgfbr3O88393 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tgfbr3O88393 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tgfbr3O88393 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.17■■□□□ 1.46
Tgfbr3O88393 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.16■■□□□ 1.46
Tgfbr3O88393 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms