Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Ubr1O70481 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Ubr1O70481 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
Ubr1O70481 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Ubr1O70481 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC34.56■■■■□ 3.12
Ubr1O70481 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ubr1O70481 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Ubr1O70481 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC34.51■■■■□ 3.12
Ubr1O70481 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Ubr1O70481 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC34.49■■■■□ 3.11
Ubr1O70481 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ubr1O70481 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Ubr1O70481 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Ubr1O70481 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Ubr1O70481 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Ubr1O70481 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC34.44■■■■□ 3.1
Ubr1O70481 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Ubr1O70481 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Ubr1O70481 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Ubr1O70481 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC34.36■■■■□ 3.09
Ubr1O70481 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC34.35■■■■□ 3.09
Ubr1O70481 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ubr1O70481 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
Ubr1O70481 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Ubr1O70481 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Ubr1O70481 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Ubr1O70481 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
Ubr1O70481 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC34.3■■■■□ 3.08
Ubr1O70481 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Ubr1O70481 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Ubr1O70481 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
Ubr1O70481 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Ubr1O70481 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ubr1O70481 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
Ubr1O70481 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ubr1O70481 Gm43863-201ENSMUST00000203822 1192 ntBASIC34.23■■■■□ 3.07
Ubr1O70481 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ubr1O70481 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC34.21■■■■□ 3.07
Ubr1O70481 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ubr1O70481 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC34.19■■■■□ 3.06
Ubr1O70481 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
Ubr1O70481 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC34.19■■■■□ 3.06
Ubr1O70481 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC34.17■■■■□ 3.06
Ubr1O70481 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
Ubr1O70481 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC34.17■■■■□ 3.06
Ubr1O70481 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC34.17■■■■□ 3.06
Ubr1O70481 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ubr1O70481 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ubr1O70481 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ubr1O70481 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
Ubr1O70481 AC157572.2-201ENSMUST00000226970 908 ntBASIC34.13■■■■□ 3.05
Ubr1O70481 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Ubr1O70481 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Ubr1O70481 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Ubr1O70481 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Ubr1O70481 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Ubr1O70481 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC34.08■■■■□ 3.05
Ubr1O70481 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC34.06■■■■□ 3.04
Ubr1O70481 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
Ubr1O70481 Gm2415-204ENSMUST00000190235 2004 ntBASIC34.05■■■■□ 3.04
Ubr1O70481 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Ubr1O70481 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Ubr1O70481 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Ubr1O70481 Gm9939-201ENSMUST00000067161 1154 ntBASIC34.03■■■■□ 3.04
Ubr1O70481 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC34.02■■■■□ 3.04
Ubr1O70481 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
Ubr1O70481 Gm8503-201ENSMUST00000118131 455 ntBASIC34.01■■■■□ 3.04
Ubr1O70481 Gm30346-201ENSMUST00000218641 1699 ntBASIC34.01■■■■□ 3.03
Ubr1O70481 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Ubr1O70481 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC33.97■■■■□ 3.03
Ubr1O70481 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Ubr1O70481 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
Ubr1O70481 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC33.96■■■■□ 3.03
Ubr1O70481 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Ubr1O70481 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC33.95■■■■□ 3.03
Ubr1O70481 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Ubr1O70481 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC33.93■■■■□ 3.02
Ubr1O70481 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Ubr1O70481 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ubr1O70481 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Ubr1O70481 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC33.86■■■■□ 3.01
Ubr1O70481 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Ubr1O70481 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC33.85■■■■□ 3.01
Ubr1O70481 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Ubr1O70481 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33.83■■■■□ 3.01
Ubr1O70481 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
Ubr1O70481 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC33.83■■■■□ 3.01
Ubr1O70481 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC33.83■■■■□ 3.01
Ubr1O70481 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC33.8■■■■□ 3
Ubr1O70481 Gm6821-201ENSMUST00000107540 542 ntBASIC33.78■■■■□ 3
Ubr1O70481 Gm42809-201ENSMUST00000198429 1138 ntBASIC33.78■■■■□ 3
Ubr1O70481 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.77■■■■□ 3
Ubr1O70481 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Ubr1O70481 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
Ubr1O70481 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
Ubr1O70481 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
Ubr1O70481 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.74■■■□□ 2.99
Ubr1O70481 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Ubr1O70481 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Ubr1O70481 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms