Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6dO55057 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.82■□□□□ 0.76
Pde6dO55057 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6dO55057 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6dO55057 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6dO55057 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.81■□□□□ 0.76
Pde6dO55057 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6dO55057 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6dO55057 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pde6dO55057 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pde6dO55057 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.78■□□□□ 0.76
Pde6dO55057 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6dO55057 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Pde6dO55057 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pde6dO55057 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6dO55057 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6dO55057 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6dO55057 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6dO55057 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6dO55057 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6dO55057 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6dO55057 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6dO55057 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6dO55057 Mipep-204ENSMUST00000225043 1548 ntBASIC19.71■□□□□ 0.75
Pde6dO55057 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6dO55057 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6dO55057 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pde6dO55057 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6dO55057 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6dO55057 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6dO55057 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6dO55057 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.67■□□□□ 0.74
Pde6dO55057 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6dO55057 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6dO55057 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.64■□□□□ 0.73
Pde6dO55057 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.63■□□□□ 0.73
Pde6dO55057 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6dO55057 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6dO55057 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.63■□□□□ 0.73
Pde6dO55057 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6dO55057 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.62■□□□□ 0.73
Pde6dO55057 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Pde6dO55057 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.62■□□□□ 0.73
Pde6dO55057 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6dO55057 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6dO55057 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6dO55057 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6dO55057 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pde6dO55057 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6dO55057 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6dO55057 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6dO55057 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6dO55057 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6dO55057 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pde6dO55057 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6dO55057 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6dO55057 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pde6dO55057 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.55■□□□□ 0.72
Pde6dO55057 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6dO55057 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6dO55057 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6dO55057 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6dO55057 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6dO55057 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.53■□□□□ 0.72
Pde6dO55057 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pde6dO55057 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6dO55057 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6dO55057 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.52■□□□□ 0.72
Pde6dO55057 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6dO55057 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pde6dO55057 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6dO55057 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Pde6dO55057 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6dO55057 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pde6dO55057 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6dO55057 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6dO55057 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pde6dO55057 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pde6dO55057 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6dO55057 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.48■□□□□ 0.71
Pde6dO55057 Gm25238-201ENSMUST00000174914 89 ntBASIC19.48■□□□□ 0.71
Pde6dO55057 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6dO55057 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6dO55057 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6dO55057 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6dO55057 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pde6dO55057 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.46■□□□□ 0.71
Pde6dO55057 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.45■□□□□ 0.7
Pde6dO55057 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6dO55057 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6dO55057 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.43■□□□□ 0.7
Pde6dO55057 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms