Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Sptlc1O35704 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Sptlc1O35704 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Sptlc1O35704 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.34■■■□□ 2.13
Sptlc1O35704 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sptlc1O35704 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.32■■■□□ 2.12
Sptlc1O35704 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.32■■■□□ 2.12
Sptlc1O35704 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Sptlc1O35704 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sptlc1O35704 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Sptlc1O35704 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Sptlc1O35704 Gm24970-201ENSMUST00000175582 82 ntBASIC28.3■■■□□ 2.12
Sptlc1O35704 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.29■■■□□ 2.12
Sptlc1O35704 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Sptlc1O35704 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Sptlc1O35704 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sptlc1O35704 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sptlc1O35704 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Sptlc1O35704 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Sptlc1O35704 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Sptlc1O35704 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sptlc1O35704 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Sptlc1O35704 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.2■■■□□ 2.1
Sptlc1O35704 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.2■■■□□ 2.1
Sptlc1O35704 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sptlc1O35704 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sptlc1O35704 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Sptlc1O35704 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Sptlc1O35704 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sptlc1O35704 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sptlc1O35704 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sptlc1O35704 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Sptlc1O35704 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sptlc1O35704 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.12■■■□□ 2.09
Sptlc1O35704 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Sptlc1O35704 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sptlc1O35704 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sptlc1O35704 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Sptlc1O35704 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Sptlc1O35704 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Sptlc1O35704 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Sptlc1O35704 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sptlc1O35704 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.06■■■□□ 2.08
Sptlc1O35704 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sptlc1O35704 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sptlc1O35704 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Sptlc1O35704 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Sptlc1O35704 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.03■■■□□ 2.08
Sptlc1O35704 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.03■■■□□ 2.08
Sptlc1O35704 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Sptlc1O35704 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.01■■■□□ 2.07
Sptlc1O35704 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Sptlc1O35704 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Sptlc1O35704 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
Sptlc1O35704 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sptlc1O35704 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Sptlc1O35704 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sptlc1O35704 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Sptlc1O35704 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sptlc1O35704 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.92■■■□□ 2.06
Sptlc1O35704 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sptlc1O35704 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Sptlc1O35704 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sptlc1O35704 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Sptlc1O35704 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.89■■■□□ 2.06
Sptlc1O35704 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Sptlc1O35704 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Sptlc1O35704 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.87■■■□□ 2.05
Sptlc1O35704 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sptlc1O35704 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sptlc1O35704 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Sptlc1O35704 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.85■■■□□ 2.05
Sptlc1O35704 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.84■■■□□ 2.05
Sptlc1O35704 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Sptlc1O35704 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Sptlc1O35704 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
Sptlc1O35704 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sptlc1O35704 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.82■■■□□ 2.04
Sptlc1O35704 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sptlc1O35704 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.81■■■□□ 2.04
Sptlc1O35704 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Sptlc1O35704 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sptlc1O35704 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sptlc1O35704 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Sptlc1O35704 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Sptlc1O35704 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
Sptlc1O35704 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Sptlc1O35704 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.76■■■□□ 2.04
Sptlc1O35704 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sptlc1O35704 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Sptlc1O35704 Gm8503-201ENSMUST00000118131 455 ntBASIC27.73■■■□□ 2.03
Sptlc1O35704 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sptlc1O35704 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.71■■■□□ 2.03
Sptlc1O35704 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sptlc1O35704 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
Sptlc1O35704 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.68■■■□□ 2.02
Sptlc1O35704 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
Sptlc1O35704 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Sptlc1O35704 Gm6821-201ENSMUST00000107540 542 ntBASIC27.65■■■□□ 2.02
Sptlc1O35704 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms