Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.26■□□□□ 0.99
Prrt1O35449 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Prrt1O35449 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.25■□□□□ 0.99
Prrt1O35449 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prrt1O35449 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prrt1O35449 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.22■□□□□ 0.99
Prrt1O35449 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Prrt1O35449 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt1O35449 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prrt1O35449 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Prrt1O35449 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prrt1O35449 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prrt1O35449 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prrt1O35449 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prrt1O35449 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Prrt1O35449 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.18■□□□□ 0.98
Prrt1O35449 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prrt1O35449 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prrt1O35449 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prrt1O35449 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.16■□□□□ 0.98
Prrt1O35449 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Prrt1O35449 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prrt1O35449 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prrt1O35449 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prrt1O35449 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Prrt1O35449 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prrt1O35449 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prrt1O35449 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prrt1O35449 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prrt1O35449 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prrt1O35449 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prrt1O35449 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Prrt1O35449 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prrt1O35449 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prrt1O35449 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prrt1O35449 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.1■□□□□ 0.97
Prrt1O35449 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prrt1O35449 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prrt1O35449 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prrt1O35449 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prrt1O35449 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prrt1O35449 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prrt1O35449 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prrt1O35449 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Prrt1O35449 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prrt1O35449 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prrt1O35449 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prrt1O35449 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prrt1O35449 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.06■□□□□ 0.96
Prrt1O35449 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.05■□□□□ 0.96
Prrt1O35449 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Prrt1O35449 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prrt1O35449 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prrt1O35449 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Prrt1O35449 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prrt1O35449 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prrt1O35449 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Prrt1O35449 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Prrt1O35449 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prrt1O35449 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prrt1O35449 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prrt1O35449 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prrt1O35449 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prrt1O35449 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prrt1O35449 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prrt1O35449 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Prrt1O35449 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prrt1O35449 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prrt1O35449 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prrt1O35449 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prrt1O35449 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Prrt1O35449 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.97■□□□□ 0.95
Prrt1O35449 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.97■□□□□ 0.95
Prrt1O35449 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prrt1O35449 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prrt1O35449 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.94■□□□□ 0.94
Prrt1O35449 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Prrt1O35449 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prrt1O35449 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prrt1O35449 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prrt1O35449 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prrt1O35449 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prrt1O35449 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prrt1O35449 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prrt1O35449 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.89■□□□□ 0.93
Prrt1O35449 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prrt1O35449 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prrt1O35449 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prrt1O35449 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prrt1O35449 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Prrt1O35449 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prrt1O35449 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt1O35449 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt1O35449 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prrt1O35449 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Prrt1O35449 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.85■□□□□ 0.93
Prrt1O35449 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prrt1O35449 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prrt1O35449 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Prrt1O35449 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms