Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfsf11O35235 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tnfsf11O35235 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfsf11O35235 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfsf11O35235 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.61■□□□□ 0.73
Tnfsf11O35235 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfsf11O35235 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Tnfsf11O35235 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf11O35235 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfsf11O35235 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.59■□□□□ 0.73
Tnfsf11O35235 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfsf11O35235 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfsf11O35235 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfsf11O35235 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfsf11O35235 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tnfsf11O35235 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfsf11O35235 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfsf11O35235 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.53■□□□□ 0.72
Tnfsf11O35235 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Tnfsf11O35235 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfsf11O35235 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfsf11O35235 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfsf11O35235 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfsf11O35235 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Tnfsf11O35235 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfsf11O35235 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfsf11O35235 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfsf11O35235 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Tnfsf11O35235 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.48■□□□□ 0.71
Tnfsf11O35235 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfsf11O35235 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfsf11O35235 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfsf11O35235 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfsf11O35235 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfsf11O35235 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.47■□□□□ 0.71
Tnfsf11O35235 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfsf11O35235 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfsf11O35235 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfsf11O35235 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Tnfsf11O35235 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfsf11O35235 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfsf11O35235 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tnfsf11O35235 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.42■□□□□ 0.7
Tnfsf11O35235 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfsf11O35235 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.41■□□□□ 0.7
Tnfsf11O35235 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf11O35235 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfsf11O35235 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.4■□□□□ 0.7
Tnfsf11O35235 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfsf11O35235 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tnfsf11O35235 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tnfsf11O35235 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.39■□□□□ 0.7
Tnfsf11O35235 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.38■□□□□ 0.69
Tnfsf11O35235 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfsf11O35235 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tnfsf11O35235 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf11O35235 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf11O35235 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf11O35235 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf11O35235 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf11O35235 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf11O35235 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf11O35235 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf11O35235 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf11O35235 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf11O35235 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf11O35235 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf11O35235 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf11O35235 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tnfsf11O35235 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf11O35235 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf11O35235 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf11O35235 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf11O35235 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfsf11O35235 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf11O35235 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf11O35235 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf11O35235 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf11O35235 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfsf11O35235 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.28■□□□□ 0.68
Tnfsf11O35235 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf11O35235 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfsf11O35235 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnfsf11O35235 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tnfsf11O35235 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfsf11O35235 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf11O35235 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf11O35235 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf11O35235 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf11O35235 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf11O35235 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf11O35235 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf11O35235 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf11O35235 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tnfsf11O35235 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf11O35235 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf11O35235 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf11O35235 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf11O35235 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tnfsf11O35235 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms