Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Gm11236J3QMS7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Gm11236J3QMS7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Gm11236J3QMS7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Gm11236J3QMS7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Gm11236J3QMS7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.41■■□□□ 1.98
Gm11236J3QMS7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm11236J3QMS7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Gm11236J3QMS7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.41■■□□□ 1.98
Gm11236J3QMS7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm11236J3QMS7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Gm11236J3QMS7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.37■■□□□ 1.97
Gm11236J3QMS7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm11236J3QMS7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Gm11236J3QMS7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Gm11236J3QMS7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Gm11236J3QMS7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Gm11236J3QMS7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Gm11236J3QMS7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Gm11236J3QMS7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Gm11236J3QMS7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Gm11236J3QMS7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Gm11236J3QMS7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Gm11236J3QMS7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Gm11236J3QMS7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.25■■□□□ 1.95
Gm11236J3QMS7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Gm11236J3QMS7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.24■■□□□ 1.95
Gm11236J3QMS7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Gm11236J3QMS7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.23■■□□□ 1.95
Gm11236J3QMS7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Gm11236J3QMS7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Gm11236J3QMS7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Gm11236J3QMS7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Gm11236J3QMS7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Gm11236J3QMS7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Gm11236J3QMS7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.18■■□□□ 1.94
Gm11236J3QMS7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Gm11236J3QMS7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.17■■□□□ 1.94
Gm11236J3QMS7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gm11236J3QMS7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Gm11236J3QMS7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Gm11236J3QMS7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Gm11236J3QMS7 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.14■■□□□ 1.94
Gm11236J3QMS7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Gm11236J3QMS7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Gm11236J3QMS7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Gm11236J3QMS7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Gm11236J3QMS7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Gm11236J3QMS7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Gm11236J3QMS7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm11236J3QMS7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Gm11236J3QMS7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
Gm11236J3QMS7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Gm11236J3QMS7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.05■■□□□ 1.92
Gm11236J3QMS7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Gm11236J3QMS7 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.05■■□□□ 1.92
Gm11236J3QMS7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Gm11236J3QMS7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Gm11236J3QMS7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.92
Gm11236J3QMS7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Gm11236J3QMS7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Gm11236J3QMS7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Gm11236J3QMS7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Gm11236J3QMS7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Gm11236J3QMS7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Gm11236J3QMS7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
Gm11236J3QMS7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Gm11236J3QMS7 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.96■■□□□ 1.91
Gm11236J3QMS7 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.95■■□□□ 1.9
Gm11236J3QMS7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Gm11236J3QMS7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Gm11236J3QMS7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Gm11236J3QMS7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Gm11236J3QMS7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Gm11236J3QMS7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Gm11236J3QMS7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Gm11236J3QMS7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Gm11236J3QMS7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Gm11236J3QMS7 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.89■■□□□ 1.9
Gm11236J3QMS7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Gm11236J3QMS7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.89■■□□□ 1.9
Gm11236J3QMS7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.89■■□□□ 1.9
Gm11236J3QMS7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Gm11236J3QMS7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Gm11236J3QMS7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Gm11236J3QMS7 Gm8503-201ENSMUST00000118131 455 ntBASIC26.86■■□□□ 1.89
Gm11236J3QMS7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Gm11236J3QMS7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
Gm11236J3QMS7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.84■■□□□ 1.89
Gm11236J3QMS7 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.84■■□□□ 1.89
Gm11236J3QMS7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Gm11236J3QMS7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Gm11236J3QMS7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Gm11236J3QMS7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Gm11236J3QMS7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Gm11236J3QMS7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Gm11236J3QMS7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Gm11236J3QMS7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Gm11236J3QMS7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Gm11236J3QMS7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms