Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rfx8D3YU81 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rfx8D3YU81 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rfx8D3YU81 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.82■■□□□ 1.88
Rfx8D3YU81 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rfx8D3YU81 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rfx8D3YU81 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rfx8D3YU81 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Rfx8D3YU81 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rfx8D3YU81 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rfx8D3YU81 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rfx8D3YU81 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rfx8D3YU81 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rfx8D3YU81 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rfx8D3YU81 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rfx8D3YU81 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Rfx8D3YU81 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Rfx8D3YU81 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Rfx8D3YU81 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Rfx8D3YU81 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Rfx8D3YU81 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rfx8D3YU81 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Rfx8D3YU81 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rfx8D3YU81 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
Rfx8D3YU81 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rfx8D3YU81 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Rfx8D3YU81 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rfx8D3YU81 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rfx8D3YU81 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Rfx8D3YU81 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Rfx8D3YU81 Zfp131-205ENSMUST00000223812 663 ntBASIC26.64■■□□□ 1.86
Rfx8D3YU81 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rfx8D3YU81 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rfx8D3YU81 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rfx8D3YU81 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Rfx8D3YU81 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Rfx8D3YU81 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.61■■□□□ 1.85
Rfx8D3YU81 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.6■■□□□ 1.85
Rfx8D3YU81 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rfx8D3YU81 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.59■■□□□ 1.85
Rfx8D3YU81 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rfx8D3YU81 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
Rfx8D3YU81 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rfx8D3YU81 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rfx8D3YU81 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rfx8D3YU81 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rfx8D3YU81 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.56■■□□□ 1.84
Rfx8D3YU81 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rfx8D3YU81 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Rfx8D3YU81 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Rfx8D3YU81 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Rfx8D3YU81 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rfx8D3YU81 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Rfx8D3YU81 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Rfx8D3YU81 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.54■■□□□ 1.84
Rfx8D3YU81 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.53■■□□□ 1.84
Rfx8D3YU81 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rfx8D3YU81 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Rfx8D3YU81 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rfx8D3YU81 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Rfx8D3YU81 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rfx8D3YU81 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Rfx8D3YU81 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Rfx8D3YU81 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.46■■□□□ 1.83
Rfx8D3YU81 Zxda-201ENSMUST00000117281 2621 ntBASIC26.46■■□□□ 1.83
Rfx8D3YU81 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rfx8D3YU81 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Rfx8D3YU81 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Rfx8D3YU81 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rfx8D3YU81 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.43■■□□□ 1.82
Rfx8D3YU81 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.43■■□□□ 1.82
Rfx8D3YU81 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Rfx8D3YU81 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rfx8D3YU81 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rfx8D3YU81 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.41■■□□□ 1.82
Rfx8D3YU81 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rfx8D3YU81 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rfx8D3YU81 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Rfx8D3YU81 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.37■■□□□ 1.81
Rfx8D3YU81 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
Rfx8D3YU81 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rfx8D3YU81 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rfx8D3YU81 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.34■■□□□ 1.81
Rfx8D3YU81 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.34■■□□□ 1.81
Rfx8D3YU81 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rfx8D3YU81 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rfx8D3YU81 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rfx8D3YU81 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rfx8D3YU81 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.3■■□□□ 1.8
Rfx8D3YU81 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Rfx8D3YU81 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rfx8D3YU81 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rfx8D3YU81 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rfx8D3YU81 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rfx8D3YU81 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rfx8D3YU81 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rfx8D3YU81 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Rfx8D3YU81 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rfx8D3YU81 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rfx8D3YU81 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms