Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm12887B1AVM1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm12887B1AVM1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Gm12887B1AVM1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gm12887B1AVM1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm12887B1AVM1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Gm12887B1AVM1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm12887B1AVM1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm12887B1AVM1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.31■□□□□ 0.84
Gm12887B1AVM1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm12887B1AVM1 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.31■□□□□ 0.84
Gm12887B1AVM1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm12887B1AVM1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm12887B1AVM1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12887B1AVM1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12887B1AVM1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12887B1AVM1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.29■□□□□ 0.84
Gm12887B1AVM1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm12887B1AVM1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm12887B1AVM1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm12887B1AVM1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12887B1AVM1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12887B1AVM1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12887B1AVM1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12887B1AVM1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12887B1AVM1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm12887B1AVM1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm12887B1AVM1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm12887B1AVM1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm12887B1AVM1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm12887B1AVM1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm12887B1AVM1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12887B1AVM1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12887B1AVM1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm12887B1AVM1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12887B1AVM1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12887B1AVM1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12887B1AVM1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm12887B1AVM1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm12887B1AVM1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.2■□□□□ 0.82
Gm12887B1AVM1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm12887B1AVM1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm12887B1AVM1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm12887B1AVM1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm12887B1AVM1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm12887B1AVM1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm12887B1AVM1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Gm12887B1AVM1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.14■□□□□ 0.81
Gm12887B1AVM1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.14■□□□□ 0.81
Gm12887B1AVM1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm12887B1AVM1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm12887B1AVM1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm12887B1AVM1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm12887B1AVM1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm12887B1AVM1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm12887B1AVM1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm12887B1AVM1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm12887B1AVM1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12887B1AVM1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12887B1AVM1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12887B1AVM1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12887B1AVM1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12887B1AVM1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Gm12887B1AVM1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12887B1AVM1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm12887B1AVM1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12887B1AVM1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm12887B1AVM1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm12887B1AVM1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm12887B1AVM1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm12887B1AVM1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm12887B1AVM1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm12887B1AVM1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm12887B1AVM1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.07■□□□□ 0.8
Gm12887B1AVM1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm12887B1AVM1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm12887B1AVM1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm12887B1AVM1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.05■□□□□ 0.8
Gm12887B1AVM1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm12887B1AVM1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm12887B1AVM1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Gm12887B1AVM1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Gm12887B1AVM1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Gm12887B1AVM1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm12887B1AVM1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12887B1AVM1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12887B1AVM1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Gm12887B1AVM1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12887B1AVM1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm12887B1AVM1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm12887B1AVM1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm12887B1AVM1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm12887B1AVM1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm12887B1AVM1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm12887B1AVM1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm12887B1AVM1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12887B1AVM1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12887B1AVM1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12887B1AVM1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm12887B1AVM1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms