Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv3-4A0A140T8Q4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv3-4A0A140T8Q4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Igkv3-4A0A140T8Q4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-4A0A140T8Q4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC15.69■□□□□ 0.1
Igkv3-4A0A140T8Q4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv3-4A0A140T8Q4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Igkv3-4A0A140T8Q4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv3-4A0A140T8Q4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv3-4A0A140T8Q4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv3-4A0A140T8Q4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv3-4A0A140T8Q4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Igkv3-4A0A140T8Q4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC15.65■□□□□ 0.1
Igkv3-4A0A140T8Q4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-4A0A140T8Q4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Igkv3-4A0A140T8Q4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv3-4A0A140T8Q4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv3-4A0A140T8Q4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv3-4A0A140T8Q4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
Igkv3-4A0A140T8Q4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv3-4A0A140T8Q4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Igkv3-4A0A140T8Q4 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.62■□□□□ 0.09
Igkv3-4A0A140T8Q4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv3-4A0A140T8Q4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-4A0A140T8Q4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-4A0A140T8Q4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-4A0A140T8Q4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-4A0A140T8Q4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-4A0A140T8Q4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-4A0A140T8Q4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv3-4A0A140T8Q4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Igkv3-4A0A140T8Q4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Igkv3-4A0A140T8Q4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Igkv3-4A0A140T8Q4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv3-4A0A140T8Q4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv3-4A0A140T8Q4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv3-4A0A140T8Q4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv3-4A0A140T8Q4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv3-4A0A140T8Q4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv3-4A0A140T8Q4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv3-4A0A140T8Q4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv3-4A0A140T8Q4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Igkv3-4A0A140T8Q4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Igkv3-4A0A140T8Q4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Igkv3-4A0A140T8Q4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv3-4A0A140T8Q4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Igkv3-4A0A140T8Q4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Igkv3-4A0A140T8Q4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv3-4A0A140T8Q4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv3-4A0A140T8Q4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Igkv3-4A0A140T8Q4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.53■□□□□ 0.08
Igkv3-4A0A140T8Q4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv3-4A0A140T8Q4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv3-4A0A140T8Q4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv3-4A0A140T8Q4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv3-4A0A140T8Q4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Igkv3-4A0A140T8Q4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv3-4A0A140T8Q4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv3-4A0A140T8Q4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Igkv3-4A0A140T8Q4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv3-4A0A140T8Q4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv3-4A0A140T8Q4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv3-4A0A140T8Q4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.48■□□□□ 0.07
Igkv3-4A0A140T8Q4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv3-4A0A140T8Q4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv3-4A0A140T8Q4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv3-4A0A140T8Q4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv3-4A0A140T8Q4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv3-4A0A140T8Q4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv3-4A0A140T8Q4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Igkv3-4A0A140T8Q4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv3-4A0A140T8Q4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv3-4A0A140T8Q4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv3-4A0A140T8Q4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv3-4A0A140T8Q4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.46■□□□□ 0.07
Igkv3-4A0A140T8Q4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Igkv3-4A0A140T8Q4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.45■□□□□ 0.06
Igkv3-4A0A140T8Q4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv3-4A0A140T8Q4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv3-4A0A140T8Q4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Igkv3-4A0A140T8Q4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv3-4A0A140T8Q4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Igkv3-4A0A140T8Q4 Amer2-203ENSMUST00000225247 2662 ntBASIC15.42■□□□□ 0.06
Igkv3-4A0A140T8Q4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv3-4A0A140T8Q4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv3-4A0A140T8Q4 Gm25262-201ENSMUST00000174934 133 ntBASIC15.41■□□□□ 0.06
Igkv3-4A0A140T8Q4 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.41■□□□□ 0.06
Igkv3-4A0A140T8Q4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv3-4A0A140T8Q4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Igkv3-4A0A140T8Q4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv3-4A0A140T8Q4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv3-4A0A140T8Q4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Igkv3-4A0A140T8Q4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms