Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.28■■□□□ 1.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.27■■□□□ 1.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26115-201ENSMUST00000175605 87 ntBASIC22.18■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.16■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.15■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8109-201ENSMUST00000194076 746 ntBASIC22.15■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Peli2-204ENSMUST00000226513 1320 ntBASIC22.11■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Amer2-203ENSMUST00000225247 2662 ntBASIC22.05■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.03■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.01■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.94■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.91■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.86■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.85■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.82■■□□□ 1.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms