Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.76■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Mipep-204ENSMUST00000225043 1548 ntBASIC19.71■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv13-3A0A0B4J1H2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.68■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Gm25238-201ENSMUST00000174914 89 ntBASIC19.65■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.64■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv13-3A0A0B4J1H2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.62■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv13-3A0A0B4J1H2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.59■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trbv13-3A0A0B4J1H2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.54■□□□□ 0.72
Trbv13-3A0A0B4J1H2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv13-3A0A0B4J1H2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv13-3A0A0B4J1H2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.49■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trbv13-3A0A0B4J1H2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trbv13-3A0A0B4J1H2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv13-3A0A0B4J1H2 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.4■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv13-3A0A0B4J1H2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.39■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Trbv13-3A0A0B4J1H2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.35■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.34■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trbv13-3A0A0B4J1H2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms