Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.04■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Peli2-204ENSMUST00000226513 1320 ntBASIC22.04■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.03■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sirpb1bA0A0A6YXN8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.97■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sirpb1bA0A0A6YXN8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.96■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Sirpb1bA0A0A6YXN8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sirpb1bA0A0A6YXN8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.94■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.94■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sirpb1bA0A0A6YXN8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sirpb1bA0A0A6YXN8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.89■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Mipep-204ENSMUST00000225043 1548 ntBASIC21.89■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.87■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sirpb1bA0A0A6YXN8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.83■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sirpb1bA0A0A6YXN8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Gm45855-201ENSMUST00000212546 880 ntBASIC21.82■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sirpb1bA0A0A6YXN8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.78■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.77■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Sirpb1bA0A0A6YXN8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Amer2-203ENSMUST00000225247 2662 ntBASIC21.75■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Sirpb1bA0A0A6YXN8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.71■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Sirpb1bA0A0A6YXN8 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.7■■□□□ 1.06
Sirpb1bA0A0A6YXN8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sirpb1bA0A0A6YXN8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sirpb1bA0A0A6YXN8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Sirpb1bA0A0A6YXN8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sirpb1bA0A0A6YXN8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.64■■□□□ 1.05
Sirpb1bA0A0A6YXN8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sirpb1bA0A0A6YXN8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.63■■□□□ 1.05
Sirpb1bA0A0A6YXN8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sirpb1bA0A0A6YXN8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms