Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.84■■□□□ 1.41
Ighv1-43A0A0A6YXN5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ighv1-43A0A0A6YXN5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ighv1-43A0A0A6YXN5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.83■■□□□ 1.41
Ighv1-43A0A0A6YXN5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.83■■□□□ 1.41
Ighv1-43A0A0A6YXN5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.82■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.8■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.79■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ighv1-43A0A0A6YXN5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.73■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.73■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ighv1-43A0A0A6YXN5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.72■■□□□ 1.39
Ighv1-43A0A0A6YXN5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.72■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ighv1-43A0A0A6YXN5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.71■■□□□ 1.39
Ighv1-43A0A0A6YXN5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Ighv1-43A0A0A6YXN5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ighv1-43A0A0A6YXN5 Gm24970-201ENSMUST00000175582 82 ntBASIC23.69■■□□□ 1.38
Ighv1-43A0A0A6YXN5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Ighv1-43A0A0A6YXN5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ighv1-43A0A0A6YXN5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.66■■□□□ 1.38
Ighv1-43A0A0A6YXN5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Ighv1-43A0A0A6YXN5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ighv1-43A0A0A6YXN5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ighv1-43A0A0A6YXN5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv1-43A0A0A6YXN5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.58■■□□□ 1.37
Ighv1-43A0A0A6YXN5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.53■■□□□ 1.36
Ighv1-43A0A0A6YXN5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.51■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.5■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.49■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ighv1-43A0A0A6YXN5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv1-43A0A0A6YXN5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ighv1-43A0A0A6YXN5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ighv1-43A0A0A6YXN5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ighv1-43A0A0A6YXN5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Ighv1-43A0A0A6YXN5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Ighv1-43A0A0A6YXN5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ighv1-43A0A0A6YXN5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ighv1-43A0A0A6YXN5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.41■■□□□ 1.34
Ighv1-43A0A0A6YXN5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Ighv1-43A0A0A6YXN5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.39■■□□□ 1.33
Ighv1-43A0A0A6YXN5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Ighv1-43A0A0A6YXN5 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.38■■□□□ 1.33
Ighv1-43A0A0A6YXN5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ighv1-43A0A0A6YXN5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.37■■□□□ 1.33
Ighv1-43A0A0A6YXN5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ighv1-43A0A0A6YXN5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Ighv1-43A0A0A6YXN5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ighv1-43A0A0A6YXN5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ighv1-43A0A0A6YXN5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.32■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.32■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv1-43A0A0A6YXN5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv1-43A0A0A6YXN5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms