Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav14d-1A0A075B6B1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trav14d-1A0A075B6B1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav14d-1A0A075B6B1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav14d-1A0A075B6B1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav14d-1A0A075B6B1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav14d-1A0A075B6B1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav14d-1A0A075B6B1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Trav14d-1A0A075B6B1 Rab21-202ENSMUST00000218831 843 ntBASIC18.74■□□□□ 0.59
Trav14d-1A0A075B6B1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav14d-1A0A075B6B1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Trav14d-1A0A075B6B1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav14d-1A0A075B6B1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav14d-1A0A075B6B1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav14d-1A0A075B6B1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav14d-1A0A075B6B1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav14d-1A0A075B6B1 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.7■□□□□ 0.58
Trav14d-1A0A075B6B1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Trav14d-1A0A075B6B1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav14d-1A0A075B6B1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav14d-1A0A075B6B1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav14d-1A0A075B6B1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav14d-1A0A075B6B1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav14d-1A0A075B6B1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Trav14d-1A0A075B6B1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav14d-1A0A075B6B1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav14d-1A0A075B6B1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav14d-1A0A075B6B1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav14d-1A0A075B6B1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav14d-1A0A075B6B1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.66■□□□□ 0.58
Trav14d-1A0A075B6B1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav14d-1A0A075B6B1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14d-1A0A075B6B1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav14d-1A0A075B6B1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14d-1A0A075B6B1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14d-1A0A075B6B1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav14d-1A0A075B6B1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav14d-1A0A075B6B1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav14d-1A0A075B6B1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.61■□□□□ 0.57
Trav14d-1A0A075B6B1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav14d-1A0A075B6B1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav14d-1A0A075B6B1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trav14d-1A0A075B6B1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav14d-1A0A075B6B1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav14d-1A0A075B6B1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav14d-1A0A075B6B1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav14d-1A0A075B6B1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav14d-1A0A075B6B1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav14d-1A0A075B6B1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.58■□□□□ 0.57
Trav14d-1A0A075B6B1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav14d-1A0A075B6B1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.58■□□□□ 0.56
Trav14d-1A0A075B6B1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav14d-1A0A075B6B1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trav14d-1A0A075B6B1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav14d-1A0A075B6B1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav14d-1A0A075B6B1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.55■□□□□ 0.56
Trav14d-1A0A075B6B1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav14d-1A0A075B6B1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav14d-1A0A075B6B1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav14d-1A0A075B6B1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav14d-1A0A075B6B1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav14d-1A0A075B6B1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav14d-1A0A075B6B1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav14d-1A0A075B6B1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav14d-1A0A075B6B1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav14d-1A0A075B6B1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav14d-1A0A075B6B1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trav14d-1A0A075B6B1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav14d-1A0A075B6B1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14d-1A0A075B6B1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14d-1A0A075B6B1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14d-1A0A075B6B1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav14d-1A0A075B6B1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav14d-1A0A075B6B1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav14d-1A0A075B6B1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trav14d-1A0A075B6B1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav14d-1A0A075B6B1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav14d-1A0A075B6B1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14d-1A0A075B6B1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14d-1A0A075B6B1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14d-1A0A075B6B1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav14d-1A0A075B6B1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14d-1A0A075B6B1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav14d-1A0A075B6B1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav14d-1A0A075B6B1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav14d-1A0A075B6B1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.45■□□□□ 0.54
Trav14d-1A0A075B6B1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav14d-1A0A075B6B1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav14d-1A0A075B6B1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav14d-1A0A075B6B1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav14d-1A0A075B6B1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav14d-1A0A075B6B1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav14d-1A0A075B6B1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav14d-1A0A075B6B1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav14d-1A0A075B6B1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Trav14d-1A0A075B6B1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav14d-1A0A075B6B1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav14d-1A0A075B6B1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav14d-1A0A075B6B1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav14d-1A0A075B6B1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms