Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav3-4A0A075B654 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav3-4A0A075B654 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-4A0A075B654 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-4A0A075B654 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Trav3-4A0A075B654 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3-4A0A075B654 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-4A0A075B654 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-4A0A075B654 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3-4A0A075B654 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3-4A0A075B654 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3-4A0A075B654 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3-4A0A075B654 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3-4A0A075B654 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav3-4A0A075B654 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trav3-4A0A075B654 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Trav3-4A0A075B654 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3-4A0A075B654 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3-4A0A075B654 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3-4A0A075B654 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-4A0A075B654 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3-4A0A075B654 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav3-4A0A075B654 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3-4A0A075B654 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3-4A0A075B654 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.8■□□□□ 0.28
Trav3-4A0A075B654 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3-4A0A075B654 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-4A0A075B654 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-4A0A075B654 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-4A0A075B654 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav3-4A0A075B654 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-4A0A075B654 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3-4A0A075B654 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3-4A0A075B654 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3-4A0A075B654 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3-4A0A075B654 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3-4A0A075B654 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-4A0A075B654 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-4A0A075B654 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-4A0A075B654 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3-4A0A075B654 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3-4A0A075B654 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav3-4A0A075B654 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav3-4A0A075B654 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Trav3-4A0A075B654 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3-4A0A075B654 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Trav3-4A0A075B654 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.74■□□□□ 0.27
Trav3-4A0A075B654 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3-4A0A075B654 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3-4A0A075B654 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3-4A0A075B654 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3-4A0A075B654 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3-4A0A075B654 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav3-4A0A075B654 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3-4A0A075B654 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav3-4A0A075B654 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-4A0A075B654 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-4A0A075B654 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3-4A0A075B654 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav3-4A0A075B654 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-4A0A075B654 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-4A0A075B654 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3-4A0A075B654 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav3-4A0A075B654 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav3-4A0A075B654 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav3-4A0A075B654 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav3-4A0A075B654 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3-4A0A075B654 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3-4A0A075B654 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3-4A0A075B654 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3-4A0A075B654 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3-4A0A075B654 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav3-4A0A075B654 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav3-4A0A075B654 Gm27325-201ENSMUST00000175467 74 ntBASIC16.62■□□□□ 0.25
Trav3-4A0A075B654 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3-4A0A075B654 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3-4A0A075B654 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3-4A0A075B654 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav3-4A0A075B654 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav3-4A0A075B654 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Trav3-4A0A075B654 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-4A0A075B654 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3-4A0A075B654 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3-4A0A075B654 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Trav3-4A0A075B654 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3-4A0A075B654 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3-4A0A075B654 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3-4A0A075B654 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav3-4A0A075B654 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav3-4A0A075B654 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav3-4A0A075B654 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav3-4A0A075B654 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav3-4A0A075B654 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav3-4A0A075B654 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3-4A0A075B654 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav3-4A0A075B654 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav3-4A0A075B654 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-4A0A075B654 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-4A0A075B654 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3-4A0A075B654 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms