Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Trav14n-3A0A075B645 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav14n-3A0A075B645 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.98■□□□□ 0.63
Trav14n-3A0A075B645 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.98■□□□□ 0.63
Trav14n-3A0A075B645 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav14n-3A0A075B645 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14n-3A0A075B645 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14n-3A0A075B645 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14n-3A0A075B645 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14n-3A0A075B645 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14n-3A0A075B645 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14n-3A0A075B645 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14n-3A0A075B645 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14n-3A0A075B645 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trav14n-3A0A075B645 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav14n-3A0A075B645 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav14n-3A0A075B645 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav14n-3A0A075B645 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav14n-3A0A075B645 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav14n-3A0A075B645 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav14n-3A0A075B645 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav14n-3A0A075B645 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav14n-3A0A075B645 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.92■□□□□ 0.62
Trav14n-3A0A075B645 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav14n-3A0A075B645 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav14n-3A0A075B645 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav14n-3A0A075B645 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav14n-3A0A075B645 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav14n-3A0A075B645 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Trav14n-3A0A075B645 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav14n-3A0A075B645 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.89■□□□□ 0.61
Trav14n-3A0A075B645 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav14n-3A0A075B645 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav14n-3A0A075B645 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav14n-3A0A075B645 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav14n-3A0A075B645 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav14n-3A0A075B645 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.86■□□□□ 0.61
Trav14n-3A0A075B645 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav14n-3A0A075B645 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav14n-3A0A075B645 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trav14n-3A0A075B645 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav14n-3A0A075B645 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav14n-3A0A075B645 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav14n-3A0A075B645 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav14n-3A0A075B645 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav14n-3A0A075B645 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav14n-3A0A075B645 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav14n-3A0A075B645 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav14n-3A0A075B645 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.81■□□□□ 0.6
Trav14n-3A0A075B645 Rab21-202ENSMUST00000218831 843 ntBASIC18.81■□□□□ 0.6
Trav14n-3A0A075B645 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.81■□□□□ 0.6
Trav14n-3A0A075B645 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav14n-3A0A075B645 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14n-3A0A075B645 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14n-3A0A075B645 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14n-3A0A075B645 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14n-3A0A075B645 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav14n-3A0A075B645 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav14n-3A0A075B645 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav14n-3A0A075B645 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav14n-3A0A075B645 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav14n-3A0A075B645 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav14n-3A0A075B645 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav14n-3A0A075B645 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav14n-3A0A075B645 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav14n-3A0A075B645 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav14n-3A0A075B645 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav14n-3A0A075B645 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav14n-3A0A075B645 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav14n-3A0A075B645 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav14n-3A0A075B645 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Trav14n-3A0A075B645 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav14n-3A0A075B645 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav14n-3A0A075B645 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav14n-3A0A075B645 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav14n-3A0A075B645 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav14n-3A0A075B645 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trav14n-3A0A075B645 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav14n-3A0A075B645 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav14n-3A0A075B645 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav14n-3A0A075B645 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav14n-3A0A075B645 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav14n-3A0A075B645 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav14n-3A0A075B645 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav14n-3A0A075B645 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Trav14n-3A0A075B645 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav14n-3A0A075B645 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav14n-3A0A075B645 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav14n-3A0A075B645 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav14n-3A0A075B645 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav14n-3A0A075B645 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav14n-3A0A075B645 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav14n-3A0A075B645 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.66■□□□□ 0.58
Trav14n-3A0A075B645 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trav14n-3A0A075B645 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav14n-3A0A075B645 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14n-3A0A075B645 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav14n-3A0A075B645 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14n-3A0A075B645 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav14n-3A0A075B645 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms