Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav16nA0A075B634 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav16nA0A075B634 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav16nA0A075B634 Amer2-203ENSMUST00000225247 2662 ntBASIC18.94■□□□□ 0.62
Trav16nA0A075B634 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Trav16nA0A075B634 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav16nA0A075B634 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trav16nA0A075B634 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16nA0A075B634 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16nA0A075B634 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav16nA0A075B634 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav16nA0A075B634 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Trav16nA0A075B634 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16nA0A075B634 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16nA0A075B634 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16nA0A075B634 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16nA0A075B634 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16nA0A075B634 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav16nA0A075B634 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.8■□□□□ 0.6
Trav16nA0A075B634 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav16nA0A075B634 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16nA0A075B634 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16nA0A075B634 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16nA0A075B634 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav16nA0A075B634 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav16nA0A075B634 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav16nA0A075B634 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trav16nA0A075B634 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16nA0A075B634 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16nA0A075B634 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16nA0A075B634 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav16nA0A075B634 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16nA0A075B634 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav16nA0A075B634 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16nA0A075B634 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav16nA0A075B634 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav16nA0A075B634 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16nA0A075B634 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16nA0A075B634 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16nA0A075B634 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav16nA0A075B634 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16nA0A075B634 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav16nA0A075B634 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16nA0A075B634 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav16nA0A075B634 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.63■□□□□ 0.57
Trav16nA0A075B634 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav16nA0A075B634 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Trav16nA0A075B634 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav16nA0A075B634 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav16nA0A075B634 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav16nA0A075B634 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Trav16nA0A075B634 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav16nA0A075B634 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.6■□□□□ 0.57
Trav16nA0A075B634 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.6■□□□□ 0.57
Trav16nA0A075B634 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav16nA0A075B634 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav16nA0A075B634 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav16nA0A075B634 Gm25262-201ENSMUST00000174934 133 ntBASIC18.57■□□□□ 0.56
Trav16nA0A075B634 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav16nA0A075B634 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms