Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav7n-4A0A075B620 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7n-4A0A075B620 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7n-4A0A075B620 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7n-4A0A075B620 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav7n-4A0A075B620 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav7n-4A0A075B620 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav7n-4A0A075B620 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7n-4A0A075B620 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7n-4A0A075B620 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7n-4A0A075B620 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav7n-4A0A075B620 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav7n-4A0A075B620 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.01■□□□□ 0.63
Trav7n-4A0A075B620 Mipep-204ENSMUST00000225043 1548 ntBASIC19■□□□□ 0.63
Trav7n-4A0A075B620 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav7n-4A0A075B620 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav7n-4A0A075B620 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19■□□□□ 0.63
Trav7n-4A0A075B620 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.99■□□□□ 0.63
Trav7n-4A0A075B620 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7n-4A0A075B620 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trav7n-4A0A075B620 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav7n-4A0A075B620 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav7n-4A0A075B620 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trav7n-4A0A075B620 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav7n-4A0A075B620 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav7n-4A0A075B620 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav7n-4A0A075B620 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav7n-4A0A075B620 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.96■□□□□ 0.63
Trav7n-4A0A075B620 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.95■□□□□ 0.62
Trav7n-4A0A075B620 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav7n-4A0A075B620 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trav7n-4A0A075B620 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav7n-4A0A075B620 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav7n-4A0A075B620 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav7n-4A0A075B620 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav7n-4A0A075B620 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav7n-4A0A075B620 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.9■□□□□ 0.62
Trav7n-4A0A075B620 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav7n-4A0A075B620 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav7n-4A0A075B620 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav7n-4A0A075B620 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav7n-4A0A075B620 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Trav7n-4A0A075B620 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav7n-4A0A075B620 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7n-4A0A075B620 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.88■□□□□ 0.61
Trav7n-4A0A075B620 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7n-4A0A075B620 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7n-4A0A075B620 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trav7n-4A0A075B620 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7n-4A0A075B620 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7n-4A0A075B620 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7n-4A0A075B620 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7n-4A0A075B620 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7n-4A0A075B620 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7n-4A0A075B620 Gm25238-201ENSMUST00000174914 89 ntBASIC18.86■□□□□ 0.61
Trav7n-4A0A075B620 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7n-4A0A075B620 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7n-4A0A075B620 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7n-4A0A075B620 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav7n-4A0A075B620 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7n-4A0A075B620 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav7n-4A0A075B620 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav7n-4A0A075B620 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav7n-4A0A075B620 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.83■□□□□ 0.61
Trav7n-4A0A075B620 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7n-4A0A075B620 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7n-4A0A075B620 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7n-4A0A075B620 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7n-4A0A075B620 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7n-4A0A075B620 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7n-4A0A075B620 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-4A0A075B620 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-4A0A075B620 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-4A0A075B620 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-4A0A075B620 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7n-4A0A075B620 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav7n-4A0A075B620 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav7n-4A0A075B620 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7n-4A0A075B620 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav7n-4A0A075B620 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav7n-4A0A075B620 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7n-4A0A075B620 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7n-4A0A075B620 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.75■□□□□ 0.59
Trav7n-4A0A075B620 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7n-4A0A075B620 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.74■□□□□ 0.59
Trav7n-4A0A075B620 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7n-4A0A075B620 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7n-4A0A075B620 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7n-4A0A075B620 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7n-4A0A075B620 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7n-4A0A075B620 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7n-4A0A075B620 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7n-4A0A075B620 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trav7n-4A0A075B620 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7n-4A0A075B620 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trav7n-4A0A075B620 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7n-4A0A075B620 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7n-4A0A075B620 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-4A0A075B620 Rab21-202ENSMUST00000218831 843 ntBASIC18.68■□□□□ 0.58
Trav7n-4A0A075B620 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms