Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.95■□□□□ 0.94
Trav7n-5A0A075B604 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav7n-5A0A075B604 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav7n-5A0A075B604 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trav7n-5A0A075B604 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav7n-5A0A075B604 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trav7n-5A0A075B604 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav7n-5A0A075B604 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav7n-5A0A075B604 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav7n-5A0A075B604 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav7n-5A0A075B604 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.89■□□□□ 0.93
Trav7n-5A0A075B604 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav7n-5A0A075B604 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav7n-5A0A075B604 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trav7n-5A0A075B604 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav7n-5A0A075B604 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.87■□□□□ 0.93
Trav7n-5A0A075B604 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav7n-5A0A075B604 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trav7n-5A0A075B604 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trav7n-5A0A075B604 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav7n-5A0A075B604 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav7n-5A0A075B604 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.83■□□□□ 0.93
Trav7n-5A0A075B604 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav7n-5A0A075B604 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav7n-5A0A075B604 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav7n-5A0A075B604 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.82■□□□□ 0.92
Trav7n-5A0A075B604 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Trav7n-5A0A075B604 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav7n-5A0A075B604 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav7n-5A0A075B604 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav7n-5A0A075B604 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav7n-5A0A075B604 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.78■□□□□ 0.92
Trav7n-5A0A075B604 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav7n-5A0A075B604 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav7n-5A0A075B604 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.77■□□□□ 0.92
Trav7n-5A0A075B604 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trav7n-5A0A075B604 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav7n-5A0A075B604 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav7n-5A0A075B604 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav7n-5A0A075B604 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav7n-5A0A075B604 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav7n-5A0A075B604 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.72■□□□□ 0.91
Trav7n-5A0A075B604 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav7n-5A0A075B604 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.71■□□□□ 0.91
Trav7n-5A0A075B604 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav7n-5A0A075B604 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Trav7n-5A0A075B604 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav7n-5A0A075B604 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav7n-5A0A075B604 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav7n-5A0A075B604 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav7n-5A0A075B604 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav7n-5A0A075B604 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.64■□□□□ 0.89
Trav7n-5A0A075B604 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Trav7n-5A0A075B604 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav7n-5A0A075B604 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav7n-5A0A075B604 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.62■□□□□ 0.89
Trav7n-5A0A075B604 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav7n-5A0A075B604 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Trav7n-5A0A075B604 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav7n-5A0A075B604 Gm9397-201ENSMUST00000200125 605 ntBASIC20.61■□□□□ 0.89
Trav7n-5A0A075B604 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav7n-5A0A075B604 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.6■□□□□ 0.89
Trav7n-5A0A075B604 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav7n-5A0A075B604 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trav7n-5A0A075B604 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trav7n-5A0A075B604 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trav7n-5A0A075B604 Gm45855-201ENSMUST00000212546 880 ntBASIC20.58■□□□□ 0.89
Trav7n-5A0A075B604 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trav7n-5A0A075B604 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav7n-5A0A075B604 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav7n-5A0A075B604 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav7n-5A0A075B604 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav7n-5A0A075B604 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav7n-5A0A075B604 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav7n-5A0A075B604 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trav7n-5A0A075B604 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav7n-5A0A075B604 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav7n-5A0A075B604 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trav7n-5A0A075B604 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav7n-5A0A075B604 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav7n-5A0A075B604 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav7n-5A0A075B604 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.54■□□□□ 0.88
Trav7n-5A0A075B604 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.52■□□□□ 0.88
Trav7n-5A0A075B604 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav7n-5A0A075B604 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav7n-5A0A075B604 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.51■□□□□ 0.87
Trav7n-5A0A075B604 Gm24970-201ENSMUST00000175582 82 ntBASIC20.51■□□□□ 0.87
Trav7n-5A0A075B604 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav7n-5A0A075B604 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav7n-5A0A075B604 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.5■□□□□ 0.87
Trav7n-5A0A075B604 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav7n-5A0A075B604 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav7n-5A0A075B604 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Trav7n-5A0A075B604 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.49■□□□□ 0.87
Trav7n-5A0A075B604 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav7n-5A0A075B604 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav7n-5A0A075B604 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav7n-5A0A075B604 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.47■□□□□ 0.87
Trav7n-5A0A075B604 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav7n-5A0A075B604 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms