Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Gm6576-201ENSMUST00000169678 883 ntBASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Gm37102-201ENSMUST00000195740 1105 ntBASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Golph3-202ENSMUST00000226517 2359 ntBASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lhx6Q9R1R0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Gm13148-201ENSMUST00000118892 745 ntBASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lhx6Q9R1R0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Gm11643-201ENSMUST00000119578 864 ntBASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lhx6Q9R1R0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Gm19087-201ENSMUST00000191430 946 ntBASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lhx6Q9R1R0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Gm7290-201ENSMUST00000104990 617 ntBASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Gm12918-201ENSMUST00000120234 636 ntBASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Gm15710-201ENSMUST00000121821 636 ntBASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Gm5075-201ENSMUST00000196916 622 ntBASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lhx6Q9R1R0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx6Q9R1R0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Lhx6Q9R1R0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx6Q9R1R0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx6Q9R1R0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx6Q9R1R0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx6Q9R1R0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lhx6Q9R1R0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms