Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.84■□□□□ 0.93
CtsfQ9R013 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.84■□□□□ 0.93
CtsfQ9R013 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CtsfQ9R013 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CtsfQ9R013 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CtsfQ9R013 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CtsfQ9R013 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CtsfQ9R013 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CtsfQ9R013 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.83■□□□□ 0.93
CtsfQ9R013 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CtsfQ9R013 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.83■□□□□ 0.92
CtsfQ9R013 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CtsfQ9R013 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.82■□□□□ 0.92
CtsfQ9R013 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.82■□□□□ 0.92
CtsfQ9R013 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CtsfQ9R013 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CtsfQ9R013 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CtsfQ9R013 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Golph3-202ENSMUST00000226517 2359 ntBASIC20.81■□□□□ 0.92
CtsfQ9R013 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CtsfQ9R013 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.81■□□□□ 0.92
CtsfQ9R013 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.81■□□□□ 0.92
CtsfQ9R013 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.81■□□□□ 0.92
CtsfQ9R013 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CtsfQ9R013 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CtsfQ9R013 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CtsfQ9R013 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CtsfQ9R013 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CtsfQ9R013 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtsfQ9R013 Mir5133-201ENSMUST00000174955 77 ntBASIC20.8■□□□□ 0.92
CtsfQ9R013 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtsfQ9R013 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CtsfQ9R013 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtsfQ9R013 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CtsfQ9R013 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtsfQ9R013 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CtsfQ9R013 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtsfQ9R013 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtsfQ9R013 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.79■□□□□ 0.92
CtsfQ9R013 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CtsfQ9R013 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.79■□□□□ 0.92
CtsfQ9R013 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CtsfQ9R013 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CtsfQ9R013 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CtsfQ9R013 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.78■□□□□ 0.92
CtsfQ9R013 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtsfQ9R013 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtsfQ9R013 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtsfQ9R013 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtsfQ9R013 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.78■□□□□ 0.92
CtsfQ9R013 Gm13146-201ENSMUST00000118508 780 ntBASIC20.78■□□□□ 0.92
CtsfQ9R013 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CtsfQ9R013 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtsfQ9R013 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CtsfQ9R013 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.77■□□□□ 0.92
CtsfQ9R013 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.77■□□□□ 0.92
CtsfQ9R013 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.77■□□□□ 0.92
CtsfQ9R013 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.77■□□□□ 0.92
CtsfQ9R013 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CtsfQ9R013 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CtsfQ9R013 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CtsfQ9R013 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
CtsfQ9R013 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 Gm12441-201ENSMUST00000121806 588 ntBASIC20.76■□□□□ 0.91
CtsfQ9R013 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CtsfQ9R013 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms