Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 Gm18666-201ENSMUST00000190039 958 ntBASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx2-4Q9EQM3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-4Q9EQM3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx2-4Q9EQM3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.82■□□□□ 0.76
Nkx2-4Q9EQM3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Gm11249-201ENSMUST00000117071 859 ntBASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-4Q9EQM3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-4Q9EQM3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-4Q9EQM3 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nkx2-4Q9EQM3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-4Q9EQM3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nkx2-4Q9EQM3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nkx2-4Q9EQM3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 Mir1199-201ENSMUST00000117015 119 ntBASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 Gm15378-201ENSMUST00000121894 207 ntBASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-4Q9EQM3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-4Q9EQM3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nkx2-4Q9EQM3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-4Q9EQM3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nkx2-4Q9EQM3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms